PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG89507.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 408aa    MW: 44575.5 Da    PI: 6.6356
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG89507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.51.7e-1388159266
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                 W  +++ aLi+a+++ + +++       r k ++ +W++v+++++  g+ r++++C +kw+nl +++kk+ +
  GBG89507.1  88 WFVEHIIALIRAKTDQDAHMQgmghayaRMKPQEWKWQDVAQRLKNVGVDRNAEKCGKKWDNLMQQFKKVHH 159
                 9999**********777777744433336689999**********************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MGDRENENET DDPPAEADDD DDDDDDNNVE CGEGGGGHAS PSLQSDMAGK GGKSKPSGRN  60
ARPRAKKGQG KGSGGEGDGD AEEKRNFWFV EHIIALIRAK TDQDAHMQGM GHAYARMKPQ  120
EWKWQDVAQR LKNVGVDRNA EKCGKKWDNL MQQFKKVHHF QSPSGGADFF QLTSKERASR  180
GFNFTMDRTV YDEIEGSTGM KHTIHSKNVA DTGASGGVRP PSTSYVDPES VADGEGGAGR  240
EDGEEGSTRG SSQTTGTPDG YGKRKSTRQQ TFEALTECME KHGELMASAM ESASKRQCSI  300
QVRQCEALEA EVEVQRKHYA ASDEVSKLMC HALLEIARPF VSGRTTRKCV VQMWSPLKPG  360
ASCWLVSCCS RVGRCAVVVT ARLRWSIPVR CCGSCMVDRH SCNLVLSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16169ARPRAKKGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-09Trihelix family protein