PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG89054.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1205aa MW: 132447 Da PI: 7.8993

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG89054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.7	1.1e-11	1062	1137	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + aL++a+r m++++ r k ++ +We+v +++++ g++r+++ C +kw+nl +++kk+ + ++ GBG89054.1 1062 WSVGDTIALVRAKRdqdlyiaGMGTSFARMKTREWKWEDVRARLQSMGVTREAVDCGKKWDNLMQQFKKVHKFQNL 1137 8889999*****9999999999*******************************************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1205 aa Download sequence
MVDISFVYLR QCTLKGILIA AEGVCFVLRV LKLMLCDRDA SVRLRVLCNL LSLMTDCGVA 60 VTFRKFLLSP GRMCNEDDCP HDQAVKSFLD VLIQRLEDKS KAVRIKSLSL FELMVSETRS 120 MIPIMPLQTK KTGVEPSTPS KEDCKPVENC LGHSEEAATN FHLLQVVEFI QWMLLQMLPL 180 FRLLLALPCN SPFFCDETVE LIGRLLCSAR AHLVGQASMM IHRQNPQQVT LPFLRTFAAD 240 RCKTIAGELQ CFFCQTYVSD VAKSVVRRIL QAYFGGGFRS WRSFLSLCSE KNLSKIAELL 300 QDVGRSAHCK AEWESRGSTK GKGGGGTLKG TSEEAKMAQE REQDGKNRLR RAAESFAVQA 360 LSMLVDIAHG CARPGPKPYH SEPMSARRWN KGSPDATNLG PLTQSSRDRG LRPEDSAYEG 420 LVLGCLVTIG VLGDAKQHRE RAASSVICSP ARQTSAWSID LLHSLQLRPR ENIRALIYII 480 RQLARTLASG IQHSGRGEGG GGMGIDRSSG QTAELQSIAF HYDDQEDPAG LQLSPDARHS 540 TEFRSIEWAL EVMSMIVSAN LMDEEAIAVI DAEGFIGDQF INLFPYFRGA VIDLLFSIKD 600 PVTAVKKILR TYELKLGVLS GPAKVGMVRQ YLQFLGDTAR IYEIAQESFQ QRLKDAQKKI 660 RSGQGRRDAS SCTESQGLEG REGGDVQRSS QQIFRSLMHE DFDYMLPLLV LVAVLLLVVV 720 FFHVCFIGLV PLTARRRRSS EKADRMDRRL DNGRPAGTTS GASNRQHSAG SVVKRSYDPR 780 LYAHLPSHEI PLSSSDDEGG NARSSTLPLG SGSTQEWAAT QSYGGRRVET PWSYTSLLNE 840 GLCDDDGNAA VDLSFQLSSS SGAAATHTRI INPHPGVDCA DNTHGGVCGL RDGGLPQSLR 900 EGGGNRNDST STVGGGVGAR ERPEWMRLSP ASRSGSGAPP GRQRPEDLRE EGADVHRDGR 960 QLWAECRQAL HQRGTETITR GVQLLHVDEG DEAAVEEAQG CDDVDGDDDC NSDDLPDIRP 1020 LGRKATNGGA TARKGPATKT QRSKKMDDDT GRSDGDGGRN FWSVGDTIAL VRAKRDQDLY 1080 IAGMGTSFAR MKTREWKWED VRARLQSMGV TREAVDCGKK WDNLMQQFKK VHKFQNLSGE 1140 KDYFKLASKA RRSKGFSFVM DRSVYDEMEA MTKGDHTIHP KNLADTGAAG GVQMPAGAGA 1200 GHHGH

Sequence ? help Back to Top

Protein Sequence Length: 1205 aa Download sequence

MVDISFVYLR QCTLKGILIA AEGVCFVLRV LKLMLCDRDA SVRLRVLCNL LSLMTDCGVA  60
VTFRKFLLSP GRMCNEDDCP HDQAVKSFLD VLIQRLEDKS KAVRIKSLSL FELMVSETRS  120
MIPIMPLQTK KTGVEPSTPS KEDCKPVENC LGHSEEAATN FHLLQVVEFI QWMLLQMLPL  180
FRLLLALPCN SPFFCDETVE LIGRLLCSAR AHLVGQASMM IHRQNPQQVT LPFLRTFAAD  240
RCKTIAGELQ CFFCQTYVSD VAKSVVRRIL QAYFGGGFRS WRSFLSLCSE KNLSKIAELL  300
QDVGRSAHCK AEWESRGSTK GKGGGGTLKG TSEEAKMAQE REQDGKNRLR RAAESFAVQA  360
LSMLVDIAHG CARPGPKPYH SEPMSARRWN KGSPDATNLG PLTQSSRDRG LRPEDSAYEG  420
LVLGCLVTIG VLGDAKQHRE RAASSVICSP ARQTSAWSID LLHSLQLRPR ENIRALIYII  480
RQLARTLASG IQHSGRGEGG GGMGIDRSSG QTAELQSIAF HYDDQEDPAG LQLSPDARHS  540
TEFRSIEWAL EVMSMIVSAN LMDEEAIAVI DAEGFIGDQF INLFPYFRGA VIDLLFSIKD  600
PVTAVKKILR TYELKLGVLS GPAKVGMVRQ YLQFLGDTAR IYEIAQESFQ QRLKDAQKKI  660
RSGQGRRDAS SCTESQGLEG REGGDVQRSS QQIFRSLMHE DFDYMLPLLV LVAVLLLVVV  720
FFHVCFIGLV PLTARRRRSS EKADRMDRRL DNGRPAGTTS GASNRQHSAG SVVKRSYDPR  780
LYAHLPSHEI PLSSSDDEGG NARSSTLPLG SGSTQEWAAT QSYGGRRVET PWSYTSLLNE  840
GLCDDDGNAA VDLSFQLSSS SGAAATHTRI INPHPGVDCA DNTHGGVCGL RDGGLPQSLR  900
EGGGNRNDST STVGGGVGAR ERPEWMRLSP ASRSGSGAPP GRQRPEDLRE EGADVHRDGR  960
QLWAECRQAL HQRGTETITR GVQLLHVDEG DEAAVEEAQG CDDVDGDDDC NSDDLPDIRP  1020
LGRKATNGGA TARKGPATKT QRSKKMDDDT GRSDGDGGRN FWSVGDTIAL VRAKRDQDLY  1080
IAGMGTSFAR MKTREWKWED VRARLQSMGV TREAVDCGKK WDNLMQQFKK VHKFQNLSGE  1140
KDYFKLASKA RRSKGFSFVM DRSVYDEMEA MTKGDHTIHP KNLADTGAAG GVQMPAGAGA  1200
GHHGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-08	Trihelix family protein