PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG88570.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 524aa MW: 53077.9 Da PI: 6.3489

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG88570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.5	2.5e-11	231	281	20	70
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 +++++ +k W+ v+++m++ gf+rs++qC++k+e + ++++ +k+ +++ GBG88570.1 231 KFKNQGNNKENWKIVAARMSANGFKRSSEQCRKKFERIWRKFQDLKADNER 281 56677789**************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MQASLVSQIP SSAERVGQGA AGGGGGGGGG GGGLHVSPCS GSPPPAAAPA AFHPDQGGGI 60 FVQFPPGGAS TSSHGLPRLS DGIPIVPTPP HVGEAAPLCS PQSYTPTSSS GGGGAAGGGG 120 DVHQQVAQSP ADGERGGGDI DGGEEGVLPA ADCKHIGGGG GGGGEGGEER GGMDGLMVPM 180 DCARDGALPL EGGSMAGEGS GSEGVGVVTA LAVKGRSPAP MGASAITPKV KFKNQGNNKE 240 NWKIVAARMS ANGFKRSSEQ CRKKFERIWR KFQDLKADNE RSGGLEFKGH GAGFPHVYDL 300 IMSSPMIGMR AVDRGTHHVR GCDLYHSAEV SESLAGALTP IHVHTTAGKA APRCLAFGSV 360 SSPSPRADPT SAVAAVIDDS ALGRQAAPAA VVLGMPLVRP EVVGIGKHDA HAASEGIGDG 420 TETGAADSRD AETGRDGSLR TGRLGGSQSR QVLMETMMGL LADLDKRFWE SYDQRVLQQA 480 EWQRERAASE AMDRRETNSI LRSLVNQLIK DGTSNGAAAD DSQR

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MQASLVSQIP SSAERVGQGA AGGGGGGGGG GGGLHVSPCS GSPPPAAAPA AFHPDQGGGI  60
FVQFPPGGAS TSSHGLPRLS DGIPIVPTPP HVGEAAPLCS PQSYTPTSSS GGGGAAGGGG  120
DVHQQVAQSP ADGERGGGDI DGGEEGVLPA ADCKHIGGGG GGGGEGGEER GGMDGLMVPM  180
DCARDGALPL EGGSMAGEGS GSEGVGVVTA LAVKGRSPAP MGASAITPKV KFKNQGNNKE  240
NWKIVAARMS ANGFKRSSEQ CRKKFERIWR KFQDLKADNE RSGGLEFKGH GAGFPHVYDL  300
IMSSPMIGMR AVDRGTHHVR GCDLYHSAEV SESLAGALTP IHVHTTAGKA APRCLAFGSV  360
SSPSPRADPT SAVAAVIDDS ALGRQAAPAA VVLGMPLVRP EVVGIGKHDA HAASEGIGDG  420
TETGAADSRD AETGRDGSLR TGRLGGSQSR QVLMETMMGL LADLDKRFWE SYDQRVLQQA  480
EWQRERAASE AMDRRETNSI LRSLVNQLIK DGTSNGAAAD DSQR