PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG88150.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 301aa    MW: 32757.9 Da    PI: 6.3594
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG88150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.51.4e-12101176270
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ + + aLi+a+r+ + +l+       r k ++ +W + + ++++ g+ r++ +C +kw+nl +++kk+ + ++ 
  GBG88150.1 101 WSVDDIIALIRAKRDQDAHLQgmghayaRMKPREWKWLDAATRLKKVGVDREADRCGKKWDNLMQQFKKVYHFQGL 176
                 99************77777764333332668999999999*****************************9887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MRSVREESIT RGVQRLRVGE DEHDGEEAVG DAHDPDWNDN GAEGGEDDAG YISSSKQVTA  60
MGGRGGKTKS CAGNGRRGKR TAGRGSDAEG DTDGEGGRHF WSVDDIIALI RAKRDQDAHL  120
QGMGHAYARM KPREWKWLDA ATRLKKVGVD READRCGKKW DNLMQQFKKV YHFQGLSEKQ  180
DFFQLSGKDR MSKDFNFNMD RAVYDEILGS TAKNHTINPK NVADTGAKGG VRLPSASSAD  240
PESVGDGDGG AEHDDDDDGS TKVRGAGSGD RSAEKHYTAS DEVSKLMCHA LLEIAKAIGK  300
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-09Trihelix family protein