PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG87653.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 269aa    MW: 29561.3 Da    PI: 9.7786
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG87653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.22.4e-0917661665
    trihelix 16 emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65
                 m+++++r k ++ +W+ v +++++  +er++ +C +kw+nl + +kk+ 
  GBG87653.1 17 GMGHAYSRMKPREWKWANVEERLKKIVVERTADKCGKKWDNLMQHFKKVH 66
                578899999***************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MVTLIREKWD QDAHLQGMGH AYSRMKPREW KWANVEERLK KIVVERTADK CGKKWDNLMQ  60
HFKKVHLFQE ASRKQDFFQL TGKERSTHGF NFTMDRAVYQ GFHREESHHT PEESADTNCS  120
AREGVRKADA IINVDTGQAA REVKVKAAPQ MARAGGIVAR TPVTAPPGGQ DSVRVQSPPA  180
TPRAQTVPEA GGAAKVAMQG SGLGAHRQDV VDAQGGAVAG SLRPMAAAAA MESHGEGDDG  240
EPLVNRQRRG IARDGIDAAT KMWVDDMRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-06Trihelix family protein