PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG87323.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 321aa    MW: 36539.9 Da    PI: 6.9863
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG87323.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.59.2e-1014562870
    trihelix 28 kplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                  + ++v+++m+e g++rs++ +++kw +l+++y++i +  ++
  GBG87323.1 14 SVRNDWVARRMKEDGYHRSAEDVRKKWTDLQNKYREIHDKCGG 56
                556678*******************************998775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MAVVQPRQKH QRRSVRNDWV ARRMKEDGYH RSAEDVRKKW TDLQNKYREI HDKCGGSGKP  60
SFWDMSAEDK KREGLTFLFE EELWEEMAWV QGKRSTMCDN TMESSALPGA HSGGSDNGTC  120
LGTPQEDSES SRKSRRTERR KASAEEGCSS SRSVSRFSME ESTRTLCAGL GDAAGTLARA  180
NAEGAQQMPL KLMRAHNRQM EFCKEVAGHT VRYYEVRVDG MHAMDSTAGM GCDAASRLAH  240
VLLFASKRNP IIPDKWDGNY RDVVGDIIRY LVDAMVEEFA ERLDDSPFYR CELDPPLEGR  300
GYLHGPVQSW MPEDDLRVRK W