PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG87165.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1303aa MW: 139987 Da PI: 7.2909

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG87165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.4	5.9e-11	509	585	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+ +++l r k k +W++v k++ + g+ +r+++ C++kw nl +++k + + +++ GBG87165.1 509 WTVEHMIALIRAKRDQDSHLAglahtmgRMKTKTWKWDDVEKRLVQMGVtSRKAVDCEKKWHNLYQQFKTVHKFMGE 585 ************777666644433337799********99999899***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1303 aa Download sequence
MRGSGSEAGK GRVGLRDGRG DVGIDGIGVR GEVGGTAGVG SDGIGIRGGR GGTGSEVGGI 60 GIGSREGGVS MGRGVGIDGI GGSRIGAQWA RSGSAGSGFA EVGEGRGWSG EHRTSSAGSC 120 SGRAIPACST TVEKYVFCKH PLAASCEIAS ISFIGVFPLA PFFSVRRACH SASASFVSTT 180 LSFMADLYRR LPLLLLAVVL LLAVVVFHIC CLVRIPGRKQ TRRTSKTARK MERVQTRTTL 240 SVGAAGSSRQ RCRSAEAVRR PYDPALYSHL PSHEIPLPPS DDDGDNLRCS SLPLGSGSTQ 300 DWMGSQLHRQ ASTPTYTDLL EGRTPAGYDP GLVDLSFGLR SGSAEKVTRT VIMNPASGTT 360 HTPALVTTRT GGSVPCRMTP AGGTVDGRRP NEEWSATEVV GQKFWDDHRR QSREASTAGI 420 TRGVAKITVG ADDILGDEDG AVGEDCEADD GAGDDDEEDD EEMEIRPVGR KRGGSRAAKK 480 LPETRTGRRG KKGVEDASAG EGSQSRDFWT VEHMIALIRA KRDQDSHLAG LAHTMGRMKT 540 KTWKWDDVEK RLVQMGVTSR KAVDCEKKWH NLYQQFKTVH KFMGESGKPN FFTLTPGERK 600 ERGFDFRMDE RVYLEMAAMT RSDHTIHPTN LADTGATGGV QMPGPRRGRI ESGGSEGGGD 660 GQDDDQGSTR DSISGGGVGG ASKRKNGRQQ TFDTIADVMK EHGSLMATTV DSASKRQCSI 720 LTRQCDIPEC EVEVQKEHYV KADQANLMMC EPLMEIAKAI RERSFRFVDQ MPPRGTSARG 780 RKEGGVGDGG ETNKGRGHIP KSKRQHIDDA SSSQTDDFLA DEVAMVDAHG TAGVARLGFG 840 RDGVSREQLQ AVKRSVVGGA ARTVPRTPNT AGVVVTGARV AGQLSAATRQ GQPRQALPLQ 900 HVLASGGGHT APAQKGDETA SPSRTAAADH TPKAGVVEGA KDRRGVDDVG RDDGRRDRKR 960 EDNDGDDRPL VPRGKGAPKE DELEEKAKLW VDCDAFWGQG PGKPLREPVG ECNDYFVAIA 1020 NGDAGAEPPS MLIMPPNDVP RFKIDDPAQR DPALRIARSV ERVVLWTIHG WIFKLQSRST 1080 GFSRAESYIT VDFATDLARA VWQALEWSRV VSPALVYHTL AMKMDVPLWF AGVKIEDHLE 1140 DDDMAARQEA TVLLLAECWT DALWCGQWAD GGRVKQERLS RLADSLRPLL CAVMWIMRMG 1200 GDDDRSHYEA WSYASMVVKP TMIAAGSYIF NWLRHMVDSA NLVLNCLGKA HLTLGDYPQC 1260 IPEWCDCGLA LGHNASLKNA AEAAKHGLIS SGPAADDDGD DGK

Sequence ? help Back to Top

Protein Sequence Length: 1303 aa Download sequence

MRGSGSEAGK GRVGLRDGRG DVGIDGIGVR GEVGGTAGVG SDGIGIRGGR GGTGSEVGGI  60
GIGSREGGVS MGRGVGIDGI GGSRIGAQWA RSGSAGSGFA EVGEGRGWSG EHRTSSAGSC  120
SGRAIPACST TVEKYVFCKH PLAASCEIAS ISFIGVFPLA PFFSVRRACH SASASFVSTT  180
LSFMADLYRR LPLLLLAVVL LLAVVVFHIC CLVRIPGRKQ TRRTSKTARK MERVQTRTTL  240
SVGAAGSSRQ RCRSAEAVRR PYDPALYSHL PSHEIPLPPS DDDGDNLRCS SLPLGSGSTQ  300
DWMGSQLHRQ ASTPTYTDLL EGRTPAGYDP GLVDLSFGLR SGSAEKVTRT VIMNPASGTT  360
HTPALVTTRT GGSVPCRMTP AGGTVDGRRP NEEWSATEVV GQKFWDDHRR QSREASTAGI  420
TRGVAKITVG ADDILGDEDG AVGEDCEADD GAGDDDEEDD EEMEIRPVGR KRGGSRAAKK  480
LPETRTGRRG KKGVEDASAG EGSQSRDFWT VEHMIALIRA KRDQDSHLAG LAHTMGRMKT  540
KTWKWDDVEK RLVQMGVTSR KAVDCEKKWH NLYQQFKTVH KFMGESGKPN FFTLTPGERK  600
ERGFDFRMDE RVYLEMAAMT RSDHTIHPTN LADTGATGGV QMPGPRRGRI ESGGSEGGGD  660
GQDDDQGSTR DSISGGGVGG ASKRKNGRQQ TFDTIADVMK EHGSLMATTV DSASKRQCSI  720
LTRQCDIPEC EVEVQKEHYV KADQANLMMC EPLMEIAKAI RERSFRFVDQ MPPRGTSARG  780
RKEGGVGDGG ETNKGRGHIP KSKRQHIDDA SSSQTDDFLA DEVAMVDAHG TAGVARLGFG  840
RDGVSREQLQ AVKRSVVGGA ARTVPRTPNT AGVVVTGARV AGQLSAATRQ GQPRQALPLQ  900
HVLASGGGHT APAQKGDETA SPSRTAAADH TPKAGVVEGA KDRRGVDDVG RDDGRRDRKR  960
EDNDGDDRPL VPRGKGAPKE DELEEKAKLW VDCDAFWGQG PGKPLREPVG ECNDYFVAIA  1020
NGDAGAEPPS MLIMPPNDVP RFKIDDPAQR DPALRIARSV ERVVLWTIHG WIFKLQSRST  1080
GFSRAESYIT VDFATDLARA VWQALEWSRV VSPALVYHTL AMKMDVPLWF AGVKIEDHLE  1140
DDDMAARQEA TVLLLAECWT DALWCGQWAD GGRVKQERLS RLADSLRPLL CAVMWIMRMG  1200
GDDDRSHYEA WSYASMVVKP TMIAAGSYIF NWLRHMVDSA NLVLNCLGKA HLTLGDYPQC  1260
IPEWCDCGLA LGHNASLKNA AEAAKHGLIS SGPAADDDGD DGK