PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG87106.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1576aa MW: 169535 Da PI: 5.751

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG87106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.1	3.1e-10	779	853	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e ++L++ +r ++++++r + k+ +W +++k+m+ +g + + C +kw+nl + ykki++ ++ GBG87106.1 779 WSTDEQMLLVRCKReqeihidGLGHDYGRMRTKEWKWVDIAKRMANGGSPKDADDCMKKWDNLFQNYKKIQRFQN 853 999*********66666666677777899************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 1576 aa Download sequence
MMTGDVVEEE FGDFLGLAGS GARDEMGVLG KAAENDIDAI VTMVGRGETT YEVHGHKLPV 60 VVGYGERLEF AALSLVGGID GLASSERADV GFDVGKERGQ VEATSSFGVD VEEMVDAGVV 120 RNSVKVTEFG VGNGKVGAGG VAMDEAMLER LGEVDMCHGI KDFLRGLMTG SAKEGIGNTI 180 GLAESMSDGE GKLDEKVQPA GLTRGDILFG EDIGDDGVVG ANGEVLAIEG MVRQLGNERG 240 GRGSRWVGPT GGDHWDGVVD AGVADGPMEE VEIEAVEVGV ANGPAVEVEV GVGVGRGGRG 300 ARLEPDVEVG IVVVTIGMEG VDVCAMLSIR LERPKMEVAK EDWRARMVSC MDCIMVSREM 360 VVAVASVVGC SAVKSRSKLS IDAVSMPLML MVKEPFAIVE GEAGGEKSSG LVRGHARRKF 420 SRTSRARSPL DVEFMADMQR RLPLLLLVVV VFLFVVFLHV CLSCRPWKQR RKRRASTKRA 480 VLQEERPMAG MKARAILLAA EGGRRPATTE PSRRYDPSMY SHLPSWETPL LPSDEEPEGD 540 ELPTFPLASG STQPLSQTVL VRGATSNERG EYKSLLQQGL GDDDDGGVDL RFGLSSGGAR 600 EASRTVITAA HASARGLQQP RREQTGPSTV RGGASVVGGV GSLPAAQQHV STASLRTSGA 660 RSSMLNRTTA SPPEGRDEGA CRPPTGSGTS VENITRGVSN MRAHSDGGDD NGCGGDDVDD 720 GFREEVEAGD DDNDNAVRPV GKTGGRGIGR SNRGGRGRSV GRGSRGGVTD DGGKSATYWS 780 TDEQMLLVRC KREQEIHIDG LGHDYGRMRT KEWKWVDIAK RMANGGSPKD ADDCMKKWDN 840 LFQNYKKIQR FQNASGRPDF FKLSNDERKE HNFKFRMERV LYNEIHSGML GNHIIFPPNI 900 ADTGSPDGVQ LPRRGAGGGE SVDSEGDGDG CPEERSSARD SDVNACSVAG GGKRKNARQQ 960 ALESIADVMD RHGELMSLTI ESSSKRQHFI EAVRHTRTAV RHTRAGSSGP KSALCGVRRD 1020 AEDDVSRTSG DRCRHPSAAS MSTRGSAHGT KCDAAAAVGL AQAKGRRHIP KSKKVRSSEA 1080 SGNVPARGSE GWAAAAEMES DDDFGMEEPQ AEATALAVRQ SARQRASDHS ASKSMLSPAP 1140 EAQQARGRDA RKDKAAVVVA EGDDDETLER RRQRNLAQDS AALLMTTRLP EKEVVPERHA 1200 IEGEAAGAAG GTATLNSAPV ATAREEAAAA ATAREDARGE KTTDREGGDV GPSRVRKETM 1260 SRELIDRALL WVDDKAFWTT REGRRLYNII HETWAAIIHE TVILPKSSTR VARISDPSQL 1320 QQAISRAAKV ANVALRVQHG WVFKSGNRAR GYNLAYQYAL ESVATDIARA MWYAEDWSNV 1380 VSVPICGHTI DLNMDLPLWF ADAHIDDRPD DDDMAAYQES TVICIAQAFR AAVQMGAHID 1440 GDFISYDRLC RVADCFRLLL VAAMWIMRMA GDDFRNHYEA FYSVNLLARP TLVASMHRSF 1500 DHRRSVVRAA KAVTERLGKA NPTFGEHPNY IPQWAPCGIT FGQDPSVTGP EDCKRLDWLG 1560 LGPPDDDGDD DKKEGA

Sequence ? help Back to Top

Protein Sequence Length: 1576 aa Download sequence

MMTGDVVEEE FGDFLGLAGS GARDEMGVLG KAAENDIDAI VTMVGRGETT YEVHGHKLPV  60
VVGYGERLEF AALSLVGGID GLASSERADV GFDVGKERGQ VEATSSFGVD VEEMVDAGVV  120
RNSVKVTEFG VGNGKVGAGG VAMDEAMLER LGEVDMCHGI KDFLRGLMTG SAKEGIGNTI  180
GLAESMSDGE GKLDEKVQPA GLTRGDILFG EDIGDDGVVG ANGEVLAIEG MVRQLGNERG  240
GRGSRWVGPT GGDHWDGVVD AGVADGPMEE VEIEAVEVGV ANGPAVEVEV GVGVGRGGRG  300
ARLEPDVEVG IVVVTIGMEG VDVCAMLSIR LERPKMEVAK EDWRARMVSC MDCIMVSREM  360
VVAVASVVGC SAVKSRSKLS IDAVSMPLML MVKEPFAIVE GEAGGEKSSG LVRGHARRKF  420
SRTSRARSPL DVEFMADMQR RLPLLLLVVV VFLFVVFLHV CLSCRPWKQR RKRRASTKRA  480
VLQEERPMAG MKARAILLAA EGGRRPATTE PSRRYDPSMY SHLPSWETPL LPSDEEPEGD  540
ELPTFPLASG STQPLSQTVL VRGATSNERG EYKSLLQQGL GDDDDGGVDL RFGLSSGGAR  600
EASRTVITAA HASARGLQQP RREQTGPSTV RGGASVVGGV GSLPAAQQHV STASLRTSGA  660
RSSMLNRTTA SPPEGRDEGA CRPPTGSGTS VENITRGVSN MRAHSDGGDD NGCGGDDVDD  720
GFREEVEAGD DDNDNAVRPV GKTGGRGIGR SNRGGRGRSV GRGSRGGVTD DGGKSATYWS  780
TDEQMLLVRC KREQEIHIDG LGHDYGRMRT KEWKWVDIAK RMANGGSPKD ADDCMKKWDN  840
LFQNYKKIQR FQNASGRPDF FKLSNDERKE HNFKFRMERV LYNEIHSGML GNHIIFPPNI  900
ADTGSPDGVQ LPRRGAGGGE SVDSEGDGDG CPEERSSARD SDVNACSVAG GGKRKNARQQ  960
ALESIADVMD RHGELMSLTI ESSSKRQHFI EAVRHTRTAV RHTRAGSSGP KSALCGVRRD  1020
AEDDVSRTSG DRCRHPSAAS MSTRGSAHGT KCDAAAAVGL AQAKGRRHIP KSKKVRSSEA  1080
SGNVPARGSE GWAAAAEMES DDDFGMEEPQ AEATALAVRQ SARQRASDHS ASKSMLSPAP  1140
EAQQARGRDA RKDKAAVVVA EGDDDETLER RRQRNLAQDS AALLMTTRLP EKEVVPERHA  1200
IEGEAAGAAG GTATLNSAPV ATAREEAAAA ATAREDARGE KTTDREGGDV GPSRVRKETM  1260
SRELIDRALL WVDDKAFWTT REGRRLYNII HETWAAIIHE TVILPKSSTR VARISDPSQL  1320
QQAISRAAKV ANVALRVQHG WVFKSGNRAR GYNLAYQYAL ESVATDIARA MWYAEDWSNV  1380
VSVPICGHTI DLNMDLPLWF ADAHIDDRPD DDDMAAYQES TVICIAQAFR AAVQMGAHID  1440
GDFISYDRLC RVADCFRLLL VAAMWIMRMA GDDFRNHYEA FYSVNLLARP TLVASMHRSF  1500
DHRRSVVRAA KAVTERLGKA NPTFGEHPNY IPQWAPCGIT FGQDPSVTGP EDCKRLDWLG  1560
LGPPDDDGDD DKKEGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	9e-07	Trihelix family protein