PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG86817.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 286aa    MW: 32186 Da    PI: 6.023
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG86817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.37.2e-1241127283
    trihelix   2 WtkqevlaLiearr......emeerlrrgklkkplWeevskkmrergfersp...kqCkekwenlnkrykkikegekkrtsessstcpyfd 83 
                 W ++++ aLiea+r       ++ ++++   +  +W ++++ +re  + rs+   k Ck+kw +l+++++ki +++kk +s+++    yf+
  GBG86817.1  41 WGREMTFALIEAKRveaakiAVDPDYGKWDTAPVKWGRIADTVREI-CPRSAknfKSCKDKWGDLSRDWRKIFDWNKKTASGEE---NYFH 127
                 **************7777777777777778*************886.5666522268********************9755554...5554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDFEEPIGSQ PDSSADADES VHEDLEDHAN VGGKKCRGEA WGREMTFALI EAKRVEAAKI  60
AVDPDYGKWD TAPVKWGRIA DTVREICPRS AKNFKSCKDK WGDLSRDWRK IFDWNKKTAS  120
GEENYFHMSV QRRKKEDLLT RFKADHYTVM HSFLAKKESV AGNRVLDAHT RNMRGPSSAS  180
GGGDTLPWPQ ASEGETSSPS VGRRPREDAD DGPGMLEVSK ALTTNTDRIA EAVERQAKTG  240
ETQVQVLERM VNIDERRLEM EERRSVAEMS NQAKLIDVFA KLAEKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-07Trihelix family protein