PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG86422.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 772aa MW: 84115.4 Da PI: 9.252

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG86422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.5	1.1e-10	137	211	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + +L++a+r m+++++ k ++ +We+v +++ + g++r+++ C++kw+nl +++kk+ + ++ GBG86422.1 137 WSVGDTVTLVRAKRdqdlyfaGMGHNFGCMKTREWRWEDVRQRLVKLGVQRKAVACDKKWDNLMQQFKKVHKYQN 211 8888899999999977777777888888889**************************************988766 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MRLSPASRSG PGTPPGRQRE DDGSTSGAQV ERHGRQSWAD ARQALRQAGA DTITRGVQEL 60 HVDEGGEAAA EEPFNCDDVD DEKDCNSDEL PDVRPLGRKA RGGGASAKKG SPTSNRRNKR 120 RDDDTGGSDG EGGRNFWSVG DTVTLVRAKR DQDLYFAGMG HNFGCMKTRE WRWEDVRQRL 180 VKLGVQRKAV ACDKKWDNLM QQFKKVHKYQ NLSGGKDYFK LASSARRSEG FSFVMDRSVF 240 DEMEAMTKGD HTIHPKNFAD TGAPGGVQMP AGAGLRGMTS AVRGEGSPST KTRDRRKILD 300 SLKKGRHVPK GKRLRPGEAS GSAPSRIAQG WVAAAQRDDD DEYASGEARA EGTASAVRES 360 DRQRSSDHSA SKGMTTPPPD ALRVQGRDTR TKKVTVVDVV DPSDDEPLEK RRLRTAAANT 420 PGTPTLPRQP HPNDEGGSAQ RVAARAVVAA RGAAGAEAAG AAGARLARRI LVGRVMTPLQ 480 VVIVGDGLPA PTIPRSVVMP KSSAKVARIS DQSQLQQATK RATTLENVVM RILHGWVFKS 540 GNRPRGYHLT FQYKLESFAT DLARVMWCGE EWSNAVSAEV CAHTIDLGMD LPLWFVGASV 600 DDRPDDDDMM AYQESTIICI AHAFRAAIQM VATIDGGFIS YERLCRVADC FRLLLAASMW 660 LMRMAGDDQR SHYEAFYFAK LVAKPTLVAS MHRAFEHRKK VLRAVNVVTE RLGKANATLG 720 EYPKYIPDWA DCGISFGHAA TITGSDEAKK LGWLGSGPPD DDDGEADGKK ET

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MRLSPASRSG PGTPPGRQRE DDGSTSGAQV ERHGRQSWAD ARQALRQAGA DTITRGVQEL  60
HVDEGGEAAA EEPFNCDDVD DEKDCNSDEL PDVRPLGRKA RGGGASAKKG SPTSNRRNKR  120
RDDDTGGSDG EGGRNFWSVG DTVTLVRAKR DQDLYFAGMG HNFGCMKTRE WRWEDVRQRL  180
VKLGVQRKAV ACDKKWDNLM QQFKKVHKYQ NLSGGKDYFK LASSARRSEG FSFVMDRSVF  240
DEMEAMTKGD HTIHPKNFAD TGAPGGVQMP AGAGLRGMTS AVRGEGSPST KTRDRRKILD  300
SLKKGRHVPK GKRLRPGEAS GSAPSRIAQG WVAAAQRDDD DEYASGEARA EGTASAVRES  360
DRQRSSDHSA SKGMTTPPPD ALRVQGRDTR TKKVTVVDVV DPSDDEPLEK RRLRTAAANT  420
PGTPTLPRQP HPNDEGGSAQ RVAARAVVAA RGAAGAEAAG AAGARLARRI LVGRVMTPLQ  480
VVIVGDGLPA PTIPRSVVMP KSSAKVARIS DQSQLQQATK RATTLENVVM RILHGWVFKS  540
GNRPRGYHLT FQYKLESFAT DLARVMWCGE EWSNAVSAEV CAHTIDLGMD LPLWFVGASV  600
DDRPDDDDMM AYQESTIICI AHAFRAAIQM VATIDGGFIS YERLCRVADC FRLLLAASMW  660
LMRMAGDDQR SHYEAFYFAK LVAKPTLVAS MHRAFEHRKK VLRAVNVVTE RLGKANATLG  720
EYPKYIPDWA DCGISFGHAA TITGSDEAKK LGWLGSGPPD DDDGEADGKK ET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-08	Trihelix family protein