PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG86218.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

C2H2

Protein Properties

Length: 1545aa MW: 164461 Da PI: 5.0192

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG86218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	1448	1467	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 ++CpdCg++F ++ +L+rH GBG86218.1 1448 FPCPDCGRRF-NHASLNRHVL 1467 89********.8888888865 PP

Sequence ? help Back to Top
Protein Sequence Length: 1545 aa Download sequence
MLCRSQAHVE CMRSFQREVG RPHKVVDLSE YAAKKKEALK RAEALREEKK RESEGKGPRT 60 RKYSWGGLPA EGLPIDYTWT KPDEDPRTLQ TESSQVSVFS SSAPRTPKQR RKPPLDTNLA 120 EAVAGSIARL TRGNGDAGGG DSGGSTPSER STGALRSSCQ SLPDPAAISR SVARQFRDIS 180 GDPRSSPRSS ASAGVVSRSP RAASDRRGRA DNGGGQGAGG CRKDKEQVCS SSGNQPASGT 240 DEGGEQTLSS PVFCLSPSSS MRGGVNDTPT LEGAGEDLLL PQGKPAAAHD DESAECGQED 300 GFDGCCSVRS GSQGDLPQSP SSLMRETKAF AAKKKPPAIS VLKEFSAFGR SLDRRGDGSG 360 MWGSVRGCVK SGSVNDLRRS VGNLREIAGS SSGGKAPLCT TEMMARASKS PQMKFVPSSI 420 QVGGKVGGKE NGAEERKKAL GAAGSRLSSS VVFERNHFSG KGGPASSTRD GYGEKCAAVP 480 KWPCVGPLPT KTGKSRPGLA GGSGLVGTSA YKSSPRSTAE AGEPKSNKAA AAGEEKRHDG 540 GKGNDKGRGR EGPEVGMGSD GYRGNCGEST DVPRVSDAMG SAGPPSSVLP TAKALEEDVE 600 YRKDLDRTDE YRKELDRTDK YKRKDLDRTD DHAENDGAME LIGEEEATFG ALGRAMEPRI 660 GKEEGDKNGE EEVVLAEGRM LEAAAAAGNA LADRAVEDRK LSSHQLLRKG EMEEDETKDA 720 SGLRRKSVDT RREEEKAAAE KKEREVVATT KPHENDTELA PAQILAVQAT TRDPYAEGEE 780 DTVRAPSYAS QSQAAERLLG EVEAKKKSDA GQRRVSIDAG RETPRQYMIE IVSEGKDDGN 840 EARNEGGGLA MESSVEQTGV QEKSIRFADE LGTRGGGPYE GREVTEGRSH ASRAEEEGSD 900 VQCSRVAEEE EVGDGSTHPG RQACLIPGEE IEEERDDAVV MEEAGGSVEG ETADRCETER 960 QGRTSAQRGG RTSEEEHDGT ELFAGSQRED RSAGIEEGRL DGAAGSAKLV SAFQNAIVAE 1020 GATSANDSGD EDKTEDDTKS KSQRCCKKTS CTVGMAGEHG EEEEEEGGGR GVSKEKPRTE 1080 HDQYGQSDGG VEIKEQDSER REDARAYGQS TASEHNSNNN RNSWQEEVST EEERENGGNS 1140 GCDMSGESSL EFETPLSTLK SERESSLEFE TPSSTFKPER GRGGGVIDFR KSIELWEKSA 1200 ECGFVTKDGR RIDGNTKSLG KLTLGEAIRY TKRKMKEGGG GGGGRDRNGT GGGTPPLPVR 1260 EKDGSGTTTK HGPPSRYRLP LTPAAPLIRA PAPPAVRSLV PSTTCDTNAP VEEGVAGKDE 1320 GSGEGVADGR GNLSETNAGD RTSDAQEDVV EDRANGADRV KNGCGIEKSE MEEEREDSDA 1380 TDDDRTAIED ARGAAHRWSE SSPAEQEAEQ QRHKEGGEHN SVRGAHVVGG ATSAVGQMTG 1440 AATGEAMFPC PDCGRRFNHA SLNRHVLFCK SSGGRARIRP SFRVNGSSSS DHERSWGHDE 1500 NLVARVGGSE ATCKDSAGKH QQQQQQQEQQ EQRPHQPQQQ EQEHP

Sequence ? help Back to Top

Protein Sequence Length: 1545 aa Download sequence

MLCRSQAHVE CMRSFQREVG RPHKVVDLSE YAAKKKEALK RAEALREEKK RESEGKGPRT  60
RKYSWGGLPA EGLPIDYTWT KPDEDPRTLQ TESSQVSVFS SSAPRTPKQR RKPPLDTNLA  120
EAVAGSIARL TRGNGDAGGG DSGGSTPSER STGALRSSCQ SLPDPAAISR SVARQFRDIS  180
GDPRSSPRSS ASAGVVSRSP RAASDRRGRA DNGGGQGAGG CRKDKEQVCS SSGNQPASGT  240
DEGGEQTLSS PVFCLSPSSS MRGGVNDTPT LEGAGEDLLL PQGKPAAAHD DESAECGQED  300
GFDGCCSVRS GSQGDLPQSP SSLMRETKAF AAKKKPPAIS VLKEFSAFGR SLDRRGDGSG  360
MWGSVRGCVK SGSVNDLRRS VGNLREIAGS SSGGKAPLCT TEMMARASKS PQMKFVPSSI  420
QVGGKVGGKE NGAEERKKAL GAAGSRLSSS VVFERNHFSG KGGPASSTRD GYGEKCAAVP  480
KWPCVGPLPT KTGKSRPGLA GGSGLVGTSA YKSSPRSTAE AGEPKSNKAA AAGEEKRHDG  540
GKGNDKGRGR EGPEVGMGSD GYRGNCGEST DVPRVSDAMG SAGPPSSVLP TAKALEEDVE  600
YRKDLDRTDE YRKELDRTDK YKRKDLDRTD DHAENDGAME LIGEEEATFG ALGRAMEPRI  660
GKEEGDKNGE EEVVLAEGRM LEAAAAAGNA LADRAVEDRK LSSHQLLRKG EMEEDETKDA  720
SGLRRKSVDT RREEEKAAAE KKEREVVATT KPHENDTELA PAQILAVQAT TRDPYAEGEE  780
DTVRAPSYAS QSQAAERLLG EVEAKKKSDA GQRRVSIDAG RETPRQYMIE IVSEGKDDGN  840
EARNEGGGLA MESSVEQTGV QEKSIRFADE LGTRGGGPYE GREVTEGRSH ASRAEEEGSD  900
VQCSRVAEEE EVGDGSTHPG RQACLIPGEE IEEERDDAVV MEEAGGSVEG ETADRCETER  960
QGRTSAQRGG RTSEEEHDGT ELFAGSQRED RSAGIEEGRL DGAAGSAKLV SAFQNAIVAE  1020
GATSANDSGD EDKTEDDTKS KSQRCCKKTS CTVGMAGEHG EEEEEEGGGR GVSKEKPRTE  1080
HDQYGQSDGG VEIKEQDSER REDARAYGQS TASEHNSNNN RNSWQEEVST EEERENGGNS  1140
GCDMSGESSL EFETPLSTLK SERESSLEFE TPSSTFKPER GRGGGVIDFR KSIELWEKSA  1200
ECGFVTKDGR RIDGNTKSLG KLTLGEAIRY TKRKMKEGGG GGGGRDRNGT GGGTPPLPVR  1260
EKDGSGTTTK HGPPSRYRLP LTPAAPLIRA PAPPAVRSLV PSTTCDTNAP VEEGVAGKDE  1320
GSGEGVADGR GNLSETNAGD RTSDAQEDVV EDRANGADRV KNGCGIEKSE MEEEREDSDA  1380
TDDDRTAIED ARGAAHRWSE SSPAEQEAEQ QRHKEGGEHN SVRGAHVVGG ATSAVGQMTG  1440
AATGEAMFPC PDCGRRFNHA SLNRHVLFCK SSGGRARIRP SFRVNGSSSS DHERSWGHDE  1500
NLVARVGGSE ATCKDSAGKH QQQQQQQEQQ EQRPHQPQQQ EQEHP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	51	KRAEALREEKKR