PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG85961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | HSF | ||||||||
Protein Properties | Length: 728aa MW: 78568.9 Da PI: 4.2417 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 116.8 | 1.3e-36 | 94 | 186 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y+++ed+++++++sw+++++sfvv+d+ e+a++vLpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF +k+F +g+k+ l++i+ GBG85961.1 94 FLTKTYDMVEDPATDDIVSWTQSNTSFVVWDPAELARDVLPKYFKHNNFSSFVRQLNTYGFRKVDPDQ---------WEFYNKWFVRGQKHFLKNIH 181 9****************************************************************999.........******************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k e GBG85961.1 182 RRKPE 186 **976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 728 aa Download sequence |
MDPNAGVVCH SNGNDQENPQ EPSTHPKSPP KSPDEETVGT PEFGLQTGEQ PAPIGSSQPP 60 STGQDSVLPS QPVDNTPPPT PIDSLSSSNL PPPFLTKTYD MVEDPATDDI VSWTQSNTSF 120 VVWDPAELAR DVLPKYFKHN NFSSFVRQLN TYGFRKVDPD QWEFYNKWFV RGQKHFLKNI 180 HRRKPERSQL QQHGMGPSSV GACIEVGKFG LEGDIEQLKR DKNVLMLELV RLRRNQELMD 240 NRLQVANSRL GVMEQQQQTV MAFLAEFVKN PSFLAQFVQR NDKAQPRITV RKKRRLPPKQ 300 NGGLNGPADA NSGQLIHYHQ FQPMAQDTTR ASLTELTNDS DITSTPMDTA EEGIGQPDRN 360 VSNSALESFL RDLNAHLAKP SNHLRTSGLT LTEVGQLTVP ATMMPTLSNG SPEAPVAGNH 420 QETASGMPAG MLPRDGSAAH VPPPPDSTSS ITNGPELKQE YTATAVGAGP LSSGGNLMGQ 480 LVTEPLPEVS TVVNEALAVP VANGGRPVAA GEGALICATS DASPSPIDQD LLLEDLGEGL 540 MGGEGLEVMN LLRVEEGDQQ ARDGAEADHV HGTTVGEVEM DAMNLLRVEE DDQQVRDGAE 600 AARVHGTMVG EVDMGMDEEQ ESNAGVSNAV TLFDDASFWA NLFANHSEDE DSALPLSIDD 660 GAKTEGVGSA MGESTAAARG DMIDSSEIVD QDGMEEGQTL WWLPSQVYSD QLDNIVEQMG 720 QLAPLNPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17750.1 | 2e-84 | HSF family protein |