PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85416.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 297aa    MW: 32883.9 Da    PI: 8.812
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.11.9e-1242113266
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                 W+ +++ aLi+a+r+ + +++       r k ++ + ++v++++   g+ r +++C++kw+nl +++kk+ +
  GBG85416.1  42 WSVEHIIALIRAKRDQDAHMQgvghayaRMKPRECKRQDVAQRLGNMGVDRDAEKCEKKWDNLMQQFKKVHH 113
                 9*************999999855544445689999**********************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MVRKGGKSKP SVRNGRPRAK KGQEKGSAGD GDGDAEEKRN FWSVEHIIAL IRAKRDQDAH  60
MQGVGHAYAR MKPRECKRQD VAQRLGNMGV DRDAEKCEKK WDNLMQQFKK VHHFQSPSGG  120
ADFFQLSAKE RASRGFNFTM DRIVYNEIEG STGMNHTIHP NNMKDTGASG GVRLPLTLNA  180
DPESVADGDG GVGQEDDDEG STRGSSQMTG TPAGSGKRKS TRQQTFDVLT NCMEKHGALM  240
TSTMESASKR QCSIQVRQCE ALEAEVEVQR KHYAASDEVS KLMCHVLLEI TKAIREW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11523GRPRAKKGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.14e-07Trihelix family protein