PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85413.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 415aa    MW: 44903.5 Da    PI: 6.5578
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.83.2e-09281346261
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkry 61 
                 W+ +e + L ++  e++  + +++       ++ + e++s++mr+ g++r+p+ C++kw +++  +
  GBG85413.1 281 WSLEERMRLAKICGEDDALIADANgphrhmTRGRRYEWISERMRDVGYNRTPEDCRKKWTKMKDTM 346
                 6666666666666666666665544444448999**************************998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MGGYEGAISI EDARLEDTKG VVGGGGPGFP GWSQDCARNS PAERGVGQRV DGHPWTFGGM  60
ERPGTGGGQQ GFYGMDSTPA GGILQGGVPR GGVGDGYGEE AVHHTSRVDA SLPQFDVNSQ  120
DRHHGHPVDN FDRQMPQLRH GQQTPCTPGS APTGGIVDDW SPARRMASAS GHSGIWDGMS  180
SPMGSSIGGG SRQMTGDVGG SDPMRHTVHG EHHLPSPPAH RLVTTNEGGS SRTFPDNEGL  240
ASGGASADGP TVFSEETNTL RGKQRACKAP LPETPKKHTP WSLEERMRLA KICGEDDALI  300
ADANGPHRHM TRGRRYEWIS ERMRDVGYNR TPEDCRKKWT KMKDTMNLIS NKCDRSGQAG  360
YYNMTADERR EKGVPLTFER SLWDAMEWWR VKVSFKCNHT LALEEMDVPE SGGGE