PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84806.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1279aa MW: 139504 Da PI: 4.1076

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.1	1.7e-11	1150	1225	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +++laLi+a+ + + +++ r k ++ +W +v++++++ gf r +C + w+nl +++kk+ + ++ GBG84806.1 1150 WSVDHILALIRAKHDQDAHMQgmghayaRIKPQEWKWLDVAQRLKKVGFDRDTDKCGKTWDNLMQQFKKVHHFNGL 1225 ************888888843332224478999999******************************998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1279 aa Download sequence
MSSGRNNDEE MEPEEEQEEV EPGPLDRLRA GEEWIIKEEF GNRICFSLAW RSPRGGCVDM 60 DMSSVAFRKD GTLLDAIFHM HLKSGHQFAR HMGDDREGTF GEELNDCERI HISVDKIPEE 120 ANSILFLVSQ FGEKVPEKKP EKKKRKLSTV PEEEQLGQPL TEAEALADDA LLQPPPAATE 180 PAPPGSEADQ AATAPADKDA ASALETGSGE PGEAKEGEVE GDLEDAEGKK GVSFSDTNQE 240 YSPTATGEKS SDESKREEGT GEESADEASP TGSAEEGTEP TKEEGEDQEV QDQVPPPATA 300 DEVAEPEAQQ QEEELSSEGE EKGETAPEGE GEETGVATTS QDPPESGEEG PDTTEAPAED 360 DAGGPRGSSG EEPGNEGGQD SAPSGGEEPA SEDEAKGASD KEDGDGDGPQ TDEEKEPTTQ 420 NAKSMDDQAD QDQDQDHAKS SGEEGDDDTG GEGSAEGESG DEEGSKPPDG EQSPPPEPEP 480 EDPYPPPTEE QLAAAAAADA SGASLETEGL GETMIVIPVT TFGTRAESLT FRVLSEEMEE 540 LIALSIGEDF ADPTVGSVAI CVIRRMVNGW CIRGLHLPAG SARTWGEALV ALPRAQAEIL 600 IPSYKRRLLP QWDILKPIPK FEHYNFEEMS KIVEAWKPVK KEEEGGAEEK EEGEGEEEEE 660 DEVPVKPPKG RRRSVESVDT AADGDSEEPE LPPLDWKVFE IRVDLGWVMQ DDANDDMEWG 720 CFLFDSHGEL VDEVSRKVKE IDGVSVEDEE EDLAVFNHYC KPPEPPEEEE EEDEEGAAAA 780 AEGAETEKKE GAEGEKPQAE GEEGGEGEGE EGEEGENGEE EEQEQEEEPE QKDEDEENED 840 GEQEAEPEPE PAPEQTAIIL FTLVREAPNK LFVLWKNAGK PDPTTFIEEI RKQKRDLTKE 900 EVDLKVAVPF ETNFWRIRLD AIPCTGESME ESMERLVDVA SYTELLQQGL SGDEGDGGVN 960 LSFGLCSGRS SATSRMVVVC PHPDDDGGQV MAVVRSSKSL APIREASGNN RDPPRQQFQS 1020 PFVSTGASAR PQWMQSLSPL SAGSSAARRR GNAGRRILAS TILVTNGTEG RKRRHQFWTP 1080 MITRTMTTTE KVGRRTKATF RRPSKTAWEA GAERRRRLRP ARNGRRGKKA AGKGSDADGD 1140 DDAEGGRHFW SVDHILALIR AKHDQDAHMQ GMGHAYARIK PQEWKWLDVA QRLKKVGFDR 1200 DTDKCGKTWD NLMQQFKKVH HFNGLSGEQD FFQLSAKETT SKGFNFNMDR AVFGGRGHGR 1260 AQSHDGGHCW HSPLVIGAT

Sequence ? help Back to Top

Protein Sequence Length: 1279 aa Download sequence

MSSGRNNDEE MEPEEEQEEV EPGPLDRLRA GEEWIIKEEF GNRICFSLAW RSPRGGCVDM  60
DMSSVAFRKD GTLLDAIFHM HLKSGHQFAR HMGDDREGTF GEELNDCERI HISVDKIPEE  120
ANSILFLVSQ FGEKVPEKKP EKKKRKLSTV PEEEQLGQPL TEAEALADDA LLQPPPAATE  180
PAPPGSEADQ AATAPADKDA ASALETGSGE PGEAKEGEVE GDLEDAEGKK GVSFSDTNQE  240
YSPTATGEKS SDESKREEGT GEESADEASP TGSAEEGTEP TKEEGEDQEV QDQVPPPATA  300
DEVAEPEAQQ QEEELSSEGE EKGETAPEGE GEETGVATTS QDPPESGEEG PDTTEAPAED  360
DAGGPRGSSG EEPGNEGGQD SAPSGGEEPA SEDEAKGASD KEDGDGDGPQ TDEEKEPTTQ  420
NAKSMDDQAD QDQDQDHAKS SGEEGDDDTG GEGSAEGESG DEEGSKPPDG EQSPPPEPEP  480
EDPYPPPTEE QLAAAAAADA SGASLETEGL GETMIVIPVT TFGTRAESLT FRVLSEEMEE  540
LIALSIGEDF ADPTVGSVAI CVIRRMVNGW CIRGLHLPAG SARTWGEALV ALPRAQAEIL  600
IPSYKRRLLP QWDILKPIPK FEHYNFEEMS KIVEAWKPVK KEEEGGAEEK EEGEGEEEEE  660
DEVPVKPPKG RRRSVESVDT AADGDSEEPE LPPLDWKVFE IRVDLGWVMQ DDANDDMEWG  720
CFLFDSHGEL VDEVSRKVKE IDGVSVEDEE EDLAVFNHYC KPPEPPEEEE EEDEEGAAAA  780
AEGAETEKKE GAEGEKPQAE GEEGGEGEGE EGEEGENGEE EEQEQEEEPE QKDEDEENED  840
GEQEAEPEPE PAPEQTAIIL FTLVREAPNK LFVLWKNAGK PDPTTFIEEI RKQKRDLTKE  900
EVDLKVAVPF ETNFWRIRLD AIPCTGESME ESMERLVDVA SYTELLQQGL SGDEGDGGVN  960
LSFGLCSGRS SATSRMVVVC PHPDDDGGQV MAVVRSSKSL APIREASGNN RDPPRQQFQS  1020
PFVSTGASAR PQWMQSLSPL SAGSSAARRR GNAGRRILAS TILVTNGTEG RKRRHQFWTP  1080
MITRTMTTTE KVGRRTKATF RRPSKTAWEA GAERRRRLRP ARNGRRGKKA AGKGSDADGD  1140
DDAEGGRHFW SVDHILALIR AKHDQDAHMQ GMGHAYARIK PQEWKWLDVA QRLKKVGFDR  1200
DTDKCGKTWD NLMQQFKKVH HFNGLSGEQD FFQLSAKETT SKGFNFNMDR AVFGGRGHGR  1260
AQSHDGGHCW HSPLVIGAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	147	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	5e-07	Trihelix family protein