PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84753.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 541aa MW: 57971.6 Da PI: 6.6578

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.9	1.5e-09	467	539	1	66
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 rW ++e+ L ++ + e+ e+++r+ k++ W+ +m+e+g++r +qCk+k++++ +y+k+k GBG84753.1 467 RWGEDETAWLCRFHNevkllmiEDTEAYGRAGVKGNFWKFMELRMKEKGYNRDHEQCKNKFNQVIEYYRKLKC 539 79999999999999977788777888888889**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MAALFTLLLV VSPVLIHGGA GDDLMTAITA DQRLHRFHQA LITTGFSKEL IRAVNDKPVT 60 IFAPVADAVD AATAAGSVSW DCLTSTKAGK AALKENLKHQ VVNGSFYTVW KLTKTNQVIP 120 ADGFPIEVTF DKATHLISLD GYVHVVEPEA IIMENAIVHL TDGVIVTDSN YAQMVDACGQ 180 AQPSASPSLG FASGLTSHEL RRIEVFVRIG LAYWVPEPHD VTGRXTHVPE SDSGTPLRGF 240 CTPIQPIGGF SFGVSGEDEH SLRSLRERLR RRAIAMAEGH SSTPHCAQHL SFHSDVAPRD 300 NCRAGSSGLS PITSADHITS ASPTQRGGAA TTPPVSDVAG GAGGSSSSPA GHGSPYSPSV 360 ASQHQVPSEY LINRLIRDIE DGISPAHNAA DIAAADNVGG NAAAPSQTPP RQSGDPTPVN 420 CTPTRASARG ESSESPSGVD REAGTSPAAR PQGQQGRACP SEKNKDRWGE DETAWLCRFH 480 NEVKLLMIED TEAYGRAGVK GNFWKFMELR MKEKGYNRDH EQCKNKFNQV IEYYRKLKCH 540 E

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MAALFTLLLV VSPVLIHGGA GDDLMTAITA DQRLHRFHQA LITTGFSKEL IRAVNDKPVT  60
IFAPVADAVD AATAAGSVSW DCLTSTKAGK AALKENLKHQ VVNGSFYTVW KLTKTNQVIP  120
ADGFPIEVTF DKATHLISLD GYVHVVEPEA IIMENAIVHL TDGVIVTDSN YAQMVDACGQ  180
AQPSASPSLG FASGLTSHEL RRIEVFVRIG LAYWVPEPHD VTGRXTHVPE SDSGTPLRGF  240
CTPIQPIGGF SFGVSGEDEH SLRSLRERLR RRAIAMAEGH SSTPHCAQHL SFHSDVAPRD  300
NCRAGSSGLS PITSADHITS ASPTQRGGAA TTPPVSDVAG GAGGSSSSPA GHGSPYSPSV  360
ASQHQVPSEY LINRLIRDIE DGISPAHNAA DIAAADNVGG NAAAPSQTPP RQSGDPTPVN  420
CTPTRASARG ESSESPSGVD REAGTSPAAR PQGQQGRACP SEKNKDRWGE DETAWLCRFH  480
NEVKLLMIED TEAYGRAGVK GNFWKFMELR MKEKGYNRDH EQCKNKFNQV IEYYRKLKCH  540
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-06	Trihelix family protein