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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG84664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | NF-YA | ||||||||
Protein Properties | Length: 172aa MW: 19508.4 Da PI: 8.5896 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 45.1 | 3.4e-14 | 122 | 151 | 1 | 30 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkl 30 +ep+YVNaKQy++Il+RRq Rakle+++ GBG84664.1 122 EEPVYVNAKQYHGILRRRQCRAKLESSRVF 151 69***********************96544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MGCLGKGLGK RFAGKGVDTH RQQHTLSVQQ TCLPSVHGEY ILAAHTPFEI GSCLRAPAYT 60 DDPYYGSLMP CSGTPVRDQM NLDSGLWSPY ECVQQEADHI QLPQLMGLHQ TRMPLPSEMM 120 EEEPVYVNAK QYHGILRRRQ CRAKLESSRV FRPRKDRNTA VKVMPIRLGP WE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 9e-09 | NF-YA family protein |