PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84610.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 527aa MW: 55372.9 Da PI: 5.5917

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.5	5.4e-11	280	353	2	69
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 Wt +e aL ++ e++ + +++ ++ +We+v++++ e+g++rs++ C++kw ++ k+ ++i++ GBG84610.1 280 WTLEERVALSRLHGEDDALMADTEgahqcmTRARRWEWVAARLGEEGYSRSAEDCRKKWAEMVKKVREIRDACD 353 778888888888888887777665556666899*******************************9999988655 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MDGRGFTAQL YGGMAPSSQF DNASPRGDDC TQARKDAAPS PPSWCYMTQD GFTCTQPQAG 60 GSQSVSCSAN AGGGTQTPTN HGSRSYTGSA RQMPTPIVPS TVLERPSAFV GTRGVTPATE 120 ERMWGASRQS HLHTSEQRTA MMPPVSNMPL PRTFSGGIRG RSPPVVRGMQ GAGRQPSPFR 180 NTEGYGGGGT QCVETIGTDN STMAGCSAEM EEESWEFDEE GSAAGADRET VDLGDEEEPT 240 AGSGDSTPSV RTASGHVRPP APQRKKGGKA AAPPKKNNPW TLEERVALSR LHGEDDALMA 300 DTEGAHQCMT RARRWEWVAA RLGEEGYSRS AEDCRKKWAE MVKKVREIRD ACDGSGKPSY 360 FDISTEERXK LGVSLTFEKP LWDAMEWYRV KSSVTCDNTM ALEDLRGTGS AGGSEGGSEG 420 AGTNCSDGSA KRQRTGVGKG RGTDSGASMH GMAGAMEDST RAVCEGLDRA AGTLARAATD 480 GAAMMAARIG DVATEIGSVA GAMREGNFVL EKLVGVMAAR AVGSQGG

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MDGRGFTAQL YGGMAPSSQF DNASPRGDDC TQARKDAAPS PPSWCYMTQD GFTCTQPQAG  60
GSQSVSCSAN AGGGTQTPTN HGSRSYTGSA RQMPTPIVPS TVLERPSAFV GTRGVTPATE  120
ERMWGASRQS HLHTSEQRTA MMPPVSNMPL PRTFSGGIRG RSPPVVRGMQ GAGRQPSPFR  180
NTEGYGGGGT QCVETIGTDN STMAGCSAEM EEESWEFDEE GSAAGADRET VDLGDEEEPT  240
AGSGDSTPSV RTASGHVRPP APQRKKGGKA AAPPKKNNPW TLEERVALSR LHGEDDALMA  300
DTEGAHQCMT RARRWEWVAA RLGEEGYSRS AEDCRKKWAE MVKKVREIRD ACDGSGKPSY  360
FDISTEERXK LGVSLTFEKP LWDAMEWYRV KSSVTCDNTM ALEDLRGTGS AGGSEGGSEG  420
AGTNCSDGSA KRQRTGVGKG RGTDSGASMH GMAGAMEDST RAVCEGLDRA AGTLARAATD  480
GAAMMAARIG DVATEIGSVA GAMREGNFVL EKLVGVMAAR AVGSQGG