PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84598.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 562aa MW: 59668.8 Da PI: 7.0833

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30	1.3e-09	294	367	1	68
trihelix 1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 +W+ +e laL +++re++ + +++ + + + e+++++mr++g +rs++ C++kw l ++ k +++ GBG84598.1 294 KWSLEECLALARIQREDDALMADASsvhklkKHGEKREWIARRMRDEGWNRSAEDCRKKWFTLGQKLKVLADKV 367 7***************999987444444488999**********************99999888777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MDRRRWLQEA AFQEQYGETE HRNRSEGVQG LQPAPPPEHL SMLNQDADRY GVPPSFPFQV 60 ASLPQWRNDP PGLREMRCAS QLPFQQSAMV AAYDGQQMLG SPQPHATSSP FSGFAARSVP 120 PPGFTATLLR EDDDVECGVD GRGAGLGVTS DRRADHEREH DNAAKGRCGD ASHEFGRYEQ 180 CGGGHVPTVD TSNPSRPAAE RSGHATPTQG QRADAGDVTA AAVLQQPSPF APATVAGAGT 240 GTTGRRRGHP PAATSTSAQA GGCADGSTVM QSTDAGGVRG RAGAQAPPAQ KKVKWSLEEC 300 LALARIQRED DALMADASSV HKLKKHGEKR EWIARRMRDE GWNRSAEDCR KKWFTLGQKL 360 KVLADKVGRS GKPGYFDMTV EERGAEGLYA NFDRRLGAEM DWILQKPSGT CDNTLNSDSL 420 NAKDGDNSAR GSSDRGGSDR ERSDVNVSAG KTRRTSSGRV NDGDGPSSMS GMSVALAEST 480 RVYVDGLDRV AATIAEAQTA GATMVAGRLG DMATKIGAVA TAMTEGNVVL QLLVGVMASQ 540 GPRGSNSPRE ARGGRDNDPS SL

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MDRRRWLQEA AFQEQYGETE HRNRSEGVQG LQPAPPPEHL SMLNQDADRY GVPPSFPFQV  60
ASLPQWRNDP PGLREMRCAS QLPFQQSAMV AAYDGQQMLG SPQPHATSSP FSGFAARSVP  120
PPGFTATLLR EDDDVECGVD GRGAGLGVTS DRRADHEREH DNAAKGRCGD ASHEFGRYEQ  180
CGGGHVPTVD TSNPSRPAAE RSGHATPTQG QRADAGDVTA AAVLQQPSPF APATVAGAGT  240
GTTGRRRGHP PAATSTSAQA GGCADGSTVM QSTDAGGVRG RAGAQAPPAQ KKVKWSLEEC  300
LALARIQRED DALMADASSV HKLKKHGEKR EWIARRMRDE GWNRSAEDCR KKWFTLGQKL  360
KVLADKVGRS GKPGYFDMTV EERGAEGLYA NFDRRLGAEM DWILQKPSGT CDNTLNSDSL  420
NAKDGDNSAR GSSDRGGSDR ERSDVNVSAG KTRRTSSGRV NDGDGPSSMS GMSVALAEST  480
RVYVDGLDRV AATIAEAQTA GATMVAGRLG DMATKIGAVA TAMTEGNVVL QLLVGVMASQ  540
GPRGSNSPRE ARGGRDNDPS SL