PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84583.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

CPP

Protein Properties

Length: 1489aa MW: 148826 Da PI: 5.9867

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	40.6	5.1e-13	1041	1079	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YC+Cfaag++C+ +C C++C N GBG84583.1 1041 SCKRCNCKKSKCLKLYCDCFAAGSYCAASCCCQNCLNLP 1079 689*********************************975 PP
2	TCR	47.5	3.6e-15	1171	1209	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnC++s+ClkkYCeC++a++ Cs +CkC++C N GBG84583.1 1171 RHKRGCNCRRSHCLKKYCECYQAEVPCSVSCKCSGCGNP 1209 589*********************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 1489 aa Download sequence
MVDIKMNLDG GGGLSSRQES SLERDLEGDP EGGDLGGCGA AKSCAAGGED GSHLFGEEDE 60 GAPATRSPAR SNPAARYAPE DSPFFKYACS LSPIKLSKTV HIQTYNELCP RYSPPPTVFK 120 SPCSRFARQW RTSDVEQRGG GGPGAAAGVG AGVGAGGGAG GGNVDGGRLV AGGGMVMTTM 180 GSFTPAIATG SFVPPCATVM PTTTAAEMQI PILVGGGGGG GGGGGVKLAL GAVRSSNGSA 240 MATPSASTVA MAGGGSAAPG NAVKISSTCS SSEIVMKREK CVLLDASHVS VSAVTAATDM 300 RGAEEDACTS VSEGRVGSST GFSGSDVSAT SDERSSSLLR AGGLREAAAG PMCRPLTLAF 360 QPLPAQTAEV AARESDKADV HSVMDEGATA TTAAAIAAAS ADASGGASAA AGIAATVNLP 420 PWFSNNVVLT GLSITKSMKN HDDSSRGFRR RRCLDFEPGA GQKRGALAAG EVVVGERGGE 480 ERAEERGERE GEKGGEREET VEVGGRVAVG GAEGGGEGEE VKVKRECESS AEEPEGDVKF 540 VRPSVVTPGG RSMELGTVEE VSGGSNAAPT AMRRTGEEEM VSTSPLKTAS AMEATSALDA 600 SDAVSTVMVC DKTPPVAQVS VPRVTAGAGG EGCGEGAKRL GRGDGGRGSY LDAGRPPGAL 660 PIASSASAAD AAAHFVTSGD LAQRGGGGGG GAEGAYGRCN EASTVESGSM RIPLSPVGLA 720 NLQQGVNDGS GIRWGGKGGL VDLCNKKVNT FSPAIQSHYR KTVAGEGEGE STTLGSSGCS 780 ESQGEVMVDG GGFQQPCLAS SAVREALSSG AVAGNRVSMQ EKAMSIEKER EERKTTAVQK 840 KTEKKGGANA NVKSSCIKRA AEDRLMGGKR SGGGGGGAAS GGCEELMGGG GGLNRGGGIT 900 WARAPTWGPQ SAIRLVRSDP VSAGELSLAA ENQGSVSGPV QLWDYDFYHH HIQQQQHNHH 960 HQQQQQQLQQ QHQQHRHQQQ QHQQQRRRLL PRVEGPDLQQ IGERSADASE SEGAGRLPIL 1020 KRRKSSGSSG ITGEEGTPSS SCKRCNCKKS KCLKLYCDCF AAGSYCAASC CCQNCLNLPE 1080 YEEIIQDTRA GIEARDPLAF TPKIIMAGGT GGGGGGSAGG ATAAAAALSA PGGGGGGGGG 1140 GGGMADAGRG EGDNPAAAQE EEFVESSASA RHKRGCNCRR SHCLKKYCEC YQAEVPCSVS 1200 CKCSGCGNPF GTKVGVGGKE QGAEEREDAK AAAVGAGLVV AEIETTERSV NGAAVVVASG 1260 RRSAIGGMEF RKQQQQQQHH FVGQSGVLPS PMSLVGESGG GGSAAVAGAI APVGGGGNRI 1320 PILFSPGSFA TSGSAEIGSH SWTSNPHFDF PASSPGGGGL LTPTSALASA QAQPSLLGAG 1380 MSGVGGDPAG CQLAMSATSV DGERRESLSS SISGGLAIAA GGAVVGGEGG GGGGVGEGGQ 1440 GGDTKQIGVG EDGAGSGLCS VPVAPCSVGI SQTVSILPPT VAYQGLLPR

Sequence ? help Back to Top

Protein Sequence Length: 1489 aa Download sequence

MVDIKMNLDG GGGLSSRQES SLERDLEGDP EGGDLGGCGA AKSCAAGGED GSHLFGEEDE  60
GAPATRSPAR SNPAARYAPE DSPFFKYACS LSPIKLSKTV HIQTYNELCP RYSPPPTVFK  120
SPCSRFARQW RTSDVEQRGG GGPGAAAGVG AGVGAGGGAG GGNVDGGRLV AGGGMVMTTM  180
GSFTPAIATG SFVPPCATVM PTTTAAEMQI PILVGGGGGG GGGGGVKLAL GAVRSSNGSA  240
MATPSASTVA MAGGGSAAPG NAVKISSTCS SSEIVMKREK CVLLDASHVS VSAVTAATDM  300
RGAEEDACTS VSEGRVGSST GFSGSDVSAT SDERSSSLLR AGGLREAAAG PMCRPLTLAF  360
QPLPAQTAEV AARESDKADV HSVMDEGATA TTAAAIAAAS ADASGGASAA AGIAATVNLP  420
PWFSNNVVLT GLSITKSMKN HDDSSRGFRR RRCLDFEPGA GQKRGALAAG EVVVGERGGE  480
ERAEERGERE GEKGGEREET VEVGGRVAVG GAEGGGEGEE VKVKRECESS AEEPEGDVKF  540
VRPSVVTPGG RSMELGTVEE VSGGSNAAPT AMRRTGEEEM VSTSPLKTAS AMEATSALDA  600
SDAVSTVMVC DKTPPVAQVS VPRVTAGAGG EGCGEGAKRL GRGDGGRGSY LDAGRPPGAL  660
PIASSASAAD AAAHFVTSGD LAQRGGGGGG GAEGAYGRCN EASTVESGSM RIPLSPVGLA  720
NLQQGVNDGS GIRWGGKGGL VDLCNKKVNT FSPAIQSHYR KTVAGEGEGE STTLGSSGCS  780
ESQGEVMVDG GGFQQPCLAS SAVREALSSG AVAGNRVSMQ EKAMSIEKER EERKTTAVQK  840
KTEKKGGANA NVKSSCIKRA AEDRLMGGKR SGGGGGGAAS GGCEELMGGG GGLNRGGGIT  900
WARAPTWGPQ SAIRLVRSDP VSAGELSLAA ENQGSVSGPV QLWDYDFYHH HIQQQQHNHH  960
HQQQQQQLQQ QHQQHRHQQQ QHQQQRRRLL PRVEGPDLQQ IGERSADASE SEGAGRLPIL  1020
KRRKSSGSSG ITGEEGTPSS SCKRCNCKKS KCLKLYCDCF AAGSYCAASC CCQNCLNLPE  1080
YEEIIQDTRA GIEARDPLAF TPKIIMAGGT GGGGGGSAGG ATAAAAALSA PGGGGGGGGG  1140
GGGMADAGRG EGDNPAAAQE EEFVESSASA RHKRGCNCRR SHCLKKYCEC YQAEVPCSVS  1200
CKCSGCGNPF GTKVGVGGKE QGAEEREDAK AAAVGAGLVV AEIETTERSV NGAAVVVASG  1260
RRSAIGGMEF RKQQQQQQHH FVGQSGVLPS PMSLVGESGG GGSAAVAGAI APVGGGGNRI  1320
PILFSPGSFA TSGSAEIGSH SWTSNPHFDF PASSPGGGGL LTPTSALASA QAQPSLLGAG  1380
MSGVGGDPAG CQLAMSATSV DGERRESLSS SISGGLAIAA GGAVVGGEGG GGGGVGEGGQ  1440
GGDTKQIGVG EDGAGSGLCS VPVAPCSVGI SQTVSILPPT VAYQGLLPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	174	GGRLVAGGG
2	867	875	GGRLVAGGG
3	1021	1051	KRRKSSGSSGITGEEGTPSSSCKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-23	CPP family protein