PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG84344.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 927aa MW: 100651 Da PI: 6.059

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG84344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.6	8.8e-10	297	372	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + aL++a+r +++++ r k + +We+v ++++ g++r ++ C +kw+nl +++kk ++ + GBG84344.1 297 WSVGDTVALVRAKRdqdlyiaGLGTSFTRMKTATWKWEDVRVRLQAMGVTRDAVDCGKKWDNLMQQFKKRENVPAD 372 888889999999997777777788899999***************************************9987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 927 aa Download sequence
MAGRLSNGRP AGTSGGSINR QRSAGSVAKQ PYNPRLYAHL RSHEIPLPLS DDEGGEARSP 60 TLPLGSGSTQ DWAATQSCGG RGVETPWSYT SLMNEGLCDD DGDAAVDLSF HLSSSSGAAA 120 MHTRIINPHL GGDCADNTRS VGGGDRNNSS PSVGGGIGAR KRPDWMRLSP AVRSGPGGTP 180 GRQPAEDLIG GVPDVQRDSR QVWAECRQEL HRGETETITR GVQRLHVDEV EDTAVDEGQG 240 CDDVDGEDGC KSDDLPDIRP LGRRATRGGS GAKKGPATKP RQTKNMDDDG EGGRNFWSVG 300 DTVALVRAKR DQDLYIAGLG TSFTRMKTAT WKWEDVRVRL QAMGVTRDAV DCGKKWDNLM 360 QQFKKRENVP ADTQGRAVGR QHVPKSKRLR SEEPSPSVPF LRGRYWAASN EDEDDDVFMT 420 EEEAADDTVA APRAALFKRR MIRPRRGELT PPPEGQQGRG QRNTKAKEVV VDVGDEDNEP 480 LESRRQRNAM QGATATGVRI CAAHEERPPQ GAMPSTSSQP RPRNAAADGG STEHGGGEVA 540 HQEARVASAG VGAGSSGNVA VVAGAREEVP VVEREVARGE NKGEREDDDP LLSWERRGGL 600 ARDLADRARL WVDDKAFWTT GEGRRLYDIV HRTREHFEAI ASGVQAPVVS RSVVMSKSAT 660 SLTRIADPAQ LQPAIIRGGA AENIVLRVLH GWVFKSGNHP RGYNLAFQYA LESVATDLAR 720 VMWYGEEWSN VVSTAVCAHT IDLNMDLPLW FAGVNIDDRP EDDDMAAYQE STVLCVVHAF 780 RAAVQMGANV DGGFISHDRL SRIADCFRLL LAACMWLMRM AGDDHRSHYE AFYFAQLVAK 840 PALIASMHRA FDHRRSVIRA TNVVTERLGK VNATFGEYPK YIPDWASCGI TSGHDASITG 900 PEDAKKRDWL GSGPLEEDGG DNGENDA

Sequence ? help Back to Top

Protein Sequence Length: 927 aa Download sequence

MAGRLSNGRP AGTSGGSINR QRSAGSVAKQ PYNPRLYAHL RSHEIPLPLS DDEGGEARSP  60
TLPLGSGSTQ DWAATQSCGG RGVETPWSYT SLMNEGLCDD DGDAAVDLSF HLSSSSGAAA  120
MHTRIINPHL GGDCADNTRS VGGGDRNNSS PSVGGGIGAR KRPDWMRLSP AVRSGPGGTP  180
GRQPAEDLIG GVPDVQRDSR QVWAECRQEL HRGETETITR GVQRLHVDEV EDTAVDEGQG  240
CDDVDGEDGC KSDDLPDIRP LGRRATRGGS GAKKGPATKP RQTKNMDDDG EGGRNFWSVG  300
DTVALVRAKR DQDLYIAGLG TSFTRMKTAT WKWEDVRVRL QAMGVTRDAV DCGKKWDNLM  360
QQFKKRENVP ADTQGRAVGR QHVPKSKRLR SEEPSPSVPF LRGRYWAASN EDEDDDVFMT  420
EEEAADDTVA APRAALFKRR MIRPRRGELT PPPEGQQGRG QRNTKAKEVV VDVGDEDNEP  480
LESRRQRNAM QGATATGVRI CAAHEERPPQ GAMPSTSSQP RPRNAAADGG STEHGGGEVA  540
HQEARVASAG VGAGSSGNVA VVAGAREEVP VVEREVARGE NKGEREDDDP LLSWERRGGL  600
ARDLADRARL WVDDKAFWTT GEGRRLYDIV HRTREHFEAI ASGVQAPVVS RSVVMSKSAT  660
SLTRIADPAQ LQPAIIRGGA AENIVLRVLH GWVFKSGNHP RGYNLAFQYA LESVATDLAR  720
VMWYGEEWSN VVSTAVCAHT IDLNMDLPLW FAGVNIDDRP EDDDMAAYQE STVLCVVHAF  780
RAAVQMGANV DGGFISHDRL SRIADCFRLL LAACMWLMRM AGDDHRSHYE AFYFAQLVAK  840
PALIASMHRA FDHRRSVIRA TNVVTERLGK VNATFGEYPK YIPDWASCGI TSGHDASITG  900
PEDAKKRDWL GSGPLEEDGG DNGENDA