PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG84230.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 317aa    MW: 35022.7 Da    PI: 6.5885
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG84230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.13.4e-11113187269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+ +  l+L++ +r        ++++++r + k+ +We+++k+ +  g+ r+   C +kw+nl + ykki++ ++
  GBG84230.1 113 WSTDDQLLLVRCKReqdmhlaGLGHNYGRMRTKEWKWEDIAKRXANAGCXREXDXCMKKWDNLFQNYKKIQRFQN 187
                 8899999999999944444444444555789**************************************998665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MADVLRRLPL LVLIIVVFLF VVFLHVCLSC RPWNLRAHND GVDENGGIGD DGDDGFREDV  60
EAVDDDGDAP IRPLGKVGGR GRGRDRGGGR DRSAGRGSRV ADGDDGGKSA AYWSTDDQLL  120
LVRCKREQDM HLAGLGHNYG RMRTKEWKWE DIAKRXANAG CXREXDXCMK KWDNLFQNYK  180
KIQRFQNASG EADFFRLSNE ERKDHNFKFR MERALYNEIH GGMLGNHTIF PPNIADTGNS  240
DGVQLPRRGA GGGESVNSEA AGDGWAEERS SPRESDNNVG SGGPKHEAEE HATAGAGVHR  300
RRHGSARRAD VLDDGVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-09Trihelix family protein