PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG84160.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 436aa    MW: 47535.6 Da    PI: 7.6293
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG84160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.18.5e-121752251969
    trihelix  19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 e l+ ++lk + W++v ++m+ +gf+r++ qCk+k++ l  +y+++k++e+
  GBG84160.1 175 EPLGHARLKTGFWKDVEQRMKGKGFNRNADQCKNKFNTLLDYYRRLKAHEG 225
                 4456778999**************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MSGLMTSPVR HDGRGHGSPG PSIVSSVDNE TVGCRSSTPP EALSAIRHAS FPLSPEPIPR  60
DGSPQPPRAR TGSPEYVINR IIRDNEAGVP SVEWPTRTAV EGDAVADPTA AGRSPPPRVP  120
FEGLNTPSPV AAPSTSQHTP CSVENSAGTS TAQPSKGPPT RPPNEVKSLL GEETEPLGHA  180
RLKTGFWKDV EQRMKGKGFN RNADQCKNKF NTLLDYYRRL KAHEGWSGLP SYWDMNASRQ  240
KKYNIDFVLR RAAYDIIHPV EKDKDSINLT NLMESGADEE HLEDSERCND VDGETEGGSE  300
DPATGSGSSP GLGNSRRGPH STGFDPVLGK RRRTATNARE SSMQAITGAM RDHTTALTRS  360
DRECVKMRCE ATRDIARHQA ELHREFMQQD IASRERIATI TGDRVEKGYL LLADAIRSVR  420
PRRNSPSSGS DSSDSR