PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG84081.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 375aa    MW: 41267.5 Da    PI: 6.2591
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG84081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix392.2e-12144217268
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 W+ +   aLi+a+r        m+++++r k+++ +W +v +++++ g+ +++++C +kw+nl +++kk+ + +
  GBG84081.1 144 WSADDMTALIRAKRdqdaylqGMGTAFGRMKSREWKWLDVEERLKKVGVDKEAERCGKKWDNLMQQFKKVHRFQ 217
                 9*************77777777778888999**************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MEGRQVMCKY AGDQGSGQRA GQSPPRTSRP SEWPGEVWAE QQWTLHPRRE ESISRGVQRL  60
RVGDDGNGGD APAVGVDDHD CNDDDFEGGV DDAGRVLSLK QTTMGGRGGQ TRACPRNPRR  120
GKKVAGKGSD AETDGDVEGG RQFWSADDMT ALIRAKRDQD AYLQGMGTAF GRMKSREWKW  180
LDVEERLKKV GVDKEAERCG KKWDNLMQQF KKVHRFQGLS GKRDFFQLSG KERLSKGFNF  240
NMDCAFYDEI LASTAKSHTI HSKNVADSGA PGGVCLPSTT SADPDSVGDG DDAAGHEDDD  300
DELTRGSSQT TGSHAGFGKR KSTRQQTFEA LTECIEKHGA LEASTMESNN KRQCSIQIRQ  360
CEALEVEVEV QKKHM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-08Trihelix family protein