PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83770.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

GATA

Protein Properties

Length: 994aa MW: 103218 Da PI: 8.3142

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	54.7	1.3e-17	655	687	1	33
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C+ Cgt kTplWR+gp+g+k+LCnaCG++++k GBG83770.1 655 CVGCGTMKTPLWRSGPSGPKSLCNACGIRHKKA 687 999****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 994 aa Download sequence
MVEGECKGKA PDNLPRGSSR VVTSMDKEID TAEDSRLTVC HAGMHGIGDR DRCNGDLEEE 60 EEEEEGGNAD SKKKVSCDGS VSKSENATPS CGAAEGTYEG YGSPFKDRSH VLKGVCNTGK 120 EVGMNPAAGA VSMTGVMRGL CNPMKGPSSR RTGSRPRQTI AAPGLGERLV LLNRTTREMG 180 AQAIAGTGAT TGTGSRTGTL TGTASGISSG TKTGTGTSSG TGTASGPGTR TGTVAGNESG 240 NGMMVYEVRA VRRNLESCAS QQARQSGQAG AALATRGATS ILTGSESASD TAASENRGAG 300 RDLASGASHQ VKQRVGNVEG GCDVKEERTL GDDVDGGGAV DSGADVAVQR VAAEPTQQRV 360 LGLESNASVL ARSIDCGTVA RLGESGECTA VEGVWSKGEC SGVAKLGEDH LQMSRVAVMR 420 GVGNGGVKVN GHPHPFAAGM KLGADVAREA EGVGRCERGS GADAEMTRGL PQFAWMESFG 480 AGVSVQKGSE AGYKGGMAVA GAPLPVDGAQ GKVPPVVACA VKGRVQLSWR DSPCLMGSGR 540 VGGKAGKGGG SAFVDIASRR CGGESRSSSE RVSERGPSCR LGSWSKWRAD AEAQGCARRE 600 VADAGCEMQD HELELQRDRE LEMRRMSNGN QSGSSNESTV GEFEESKPGA ASRACVGCGT 660 MKTPLWRSGP SGPKSLCNAC GIRHKKASKL RASMSGEDNT EPMIRITLAA KSIKSGPRKR 720 KASAREQSVN TVELPVEHHV SGSVEVCASV ATDSTAPVEG CCPSSSPQSQ SDHFPLKNKM 780 WMGMSARVMK KGRTVVVDPE RDASRAMAGD ERCRSSSCSE AGEGDHTRSS ADSCVTLQGS 840 PPSMVSQLMK GAGCNAAAAA AYMKTSPSST AVMGLFPRVS SGQGRPDTHC VEPPIGWGGR 900 RARAGERMSH KDWARKRKSS LEGPEIAEDT GVRTKLGGRG PSDEVEGAIL LMTLFKGCPV 960 RTTRQMPRKR DFPAKMDKRV EEQTTWYGAD LVWS

Sequence ? help Back to Top

Protein Sequence Length: 994 aa Download sequence

MVEGECKGKA PDNLPRGSSR VVTSMDKEID TAEDSRLTVC HAGMHGIGDR DRCNGDLEEE  60
EEEEEGGNAD SKKKVSCDGS VSKSENATPS CGAAEGTYEG YGSPFKDRSH VLKGVCNTGK  120
EVGMNPAAGA VSMTGVMRGL CNPMKGPSSR RTGSRPRQTI AAPGLGERLV LLNRTTREMG  180
AQAIAGTGAT TGTGSRTGTL TGTASGISSG TKTGTGTSSG TGTASGPGTR TGTVAGNESG  240
NGMMVYEVRA VRRNLESCAS QQARQSGQAG AALATRGATS ILTGSESASD TAASENRGAG  300
RDLASGASHQ VKQRVGNVEG GCDVKEERTL GDDVDGGGAV DSGADVAVQR VAAEPTQQRV  360
LGLESNASVL ARSIDCGTVA RLGESGECTA VEGVWSKGEC SGVAKLGEDH LQMSRVAVMR  420
GVGNGGVKVN GHPHPFAAGM KLGADVAREA EGVGRCERGS GADAEMTRGL PQFAWMESFG  480
AGVSVQKGSE AGYKGGMAVA GAPLPVDGAQ GKVPPVVACA VKGRVQLSWR DSPCLMGSGR  540
VGGKAGKGGG SAFVDIASRR CGGESRSSSE RVSERGPSCR LGSWSKWRAD AEAQGCARRE  600
VADAGCEMQD HELELQRDRE LEMRRMSNGN QSGSSNESTV GEFEESKPGA ASRACVGCGT  660
MKTPLWRSGP SGPKSLCNAC GIRHKKASKL RASMSGEDNT EPMIRITLAA KSIKSGPRKR  720
KASAREQSVN TVELPVEHHV SGSVEVCASV ATDSTAPVEG CCPSSSPQSQ SDHFPLKNKM  780
WMGMSARVMK KGRTVVVDPE RDASRAMAGD ERCRSSSCSE AGEGDHTRSS ADSCVTLQGS  840
PPSMVSQLMK GAGCNAAAAA AYMKTSPSST AVMGLFPRVS SGQGRPDTHC VEPPIGWGGR  900
RARAGERMSH KDWARKRKSS LEGPEIAEDT GVRTKLGGRG PSDEVEGAIL LMTLFKGCPV  960
RTTRQMPRKR DFPAKMDKRV EEQTTWYGAD LVWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	542	550	GGKAGKGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06740.1	9e-14	GATA family protein