PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83766.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1600aa MW: 175117 Da PI: 6.3812

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.2	2.4e-09	964	1039	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W +e l+L++ +r m++++r+ + k+ +W++++k+m + g + + C +kw+nl + ykki++ ++ GBG83766.1 964 WFPEEQLQLVRCKReqemhlaGMGHNYRQMRTKEWKWDDIAKRMVSAGKPKDADDCMKKWDNLFQNYKKIQRFQNA 1039 8999999999999966666666777777889**************************************9987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1600 aa Download sequence
MEGSSFEEIT AVPSTSQARQ ERLTRHINVL RRLLALLSDP DRTPPIIPJR LGTSTRVYRA 60 LWDSGSQGDF VHPRVVEEAR LATSGSRSHI SVTLGDNKTQ RFFDQTVPDL HFSLTLQPPD 120 STQAPRRYHS SAYFDVLETG YVFILGTPWS RRFRSTEAEW AFETLILKMK CGQTHRVPFI 180 GTTGDTPPNL PPQDPRSSGS HPDISFTSPR QFAHFIRQED VTLYSVNVMD LLRYDPLCPE 240 VELISLEPDP PDPSSIFAAP ISTSTPQPAD TPSTSQVPTP STAESTHTSC ANANVEELMR 300 FTTDLEPVIH DLIREYRDVF PPYFSYSGIP PMRGVEHSIQ LVPDYRVHHQ APYRLLIPEA 360 TELKRQLEEL LRLGFIKPSN SPWGAPVLFA RKADGTLRLC IDYMTGITSR GSKDPSNPRD 420 GSGSKDGTDQ KEKPVQKENP KDGEGSGNNE GSVSGEEGKK GTEGKDGSDP AAGLDPKSVT 480 SQQVLKDQAE PVNEGEDAGK KGVMREKEAD PNPFPPAARK QDPKKGGLKA VGKNKREETT 540 GEQTEVTKSQ YVEKEKDIAE KGEVEMERSI EEEPTPKEKD PQNERMVEGQ GEGQERQNEA 600 NDPKGKADMS EVARAQLGLV VNLMADVGRR LPLLVLVVVV FLLVVFLHVC LSWRPWKQHR 660 KRRASTKRSA GERTMAGMQG RVGVGADEGG RRPAMAEPRR RYDPSMYAHL QSWETPLPLS 720 DEEPETEELP TLPLASGWTH LWSQTVRAGG SGFNEGGEYT SLPQQGLGDD DDGGLDLRFG 780 LCSGGSKEAS RTLIIDIDRS PRGVERGGSQ LLRRLGSTAP FADRSTSNWP AHNGATVGSP 840 CIDCARPSMP ERTTPTQSDV RDAGASRLLV RPVPTVENIT RGVSNIRAHS DGDDDDCFGG 900 DDADERLTED VDAGDDDEDI PVRPLGKTGG RGRPRSRGAV RGRSVDRGDR GCVSEDAGKS 960 VTYWFPEEQL QLVRCKREQE MHLAGMGHNY RQMRTKEWKW DDIAKRMVSA GKPKDADDCM 1020 KKWDNLFQNY KKIQRFQNAS ASRRGGGGGE SVGSEAGGEG FPEERSSARE SENNAGSGAX 1080 GXKXKNXXQQ ALESIADVMD RHGELMSSTI ESSSKRQCSI FTRQCDILEQ EVAVQKEHYA 1140 ASNKTQRMMC HALMEIVVAI RGRTTIFQRS GMLRRGWSTA IRSLQICAPE VARLSSPTAR 1200 GTGRGKKREG LPDDNQVTGK ARRHVPKAKR LRSDDASTRV PLGGAQGWAA EAGGDYDDDF 1260 ATDEDQAHAT ASGVRESGGK RQSDHSASKR LMTPPPEKKQ VRARDRRTYD AEVDELGDDD 1320 NEPLERRRLR SRTAATPPPA ASGHTLAGET TVMGRLPATT AAPRPRNTAA EGGSVQRGGG 1380 GVVAVHTGAV GVEVAGAAGA VAGVSGSAPP VAAAREEGAV VAMARDDERG EKRSDREGGE 1440 AGSNRPRRGV TRIAKIADPS QLQQATSRAS AVENIALRVL HGWVFKSGNR PRGYNLAFQY 1500 ALESVVTDIA RAMWYDEEWC NVVSPAVCAH TIDLSMDLPL WFAGVKVENR PDGDDMAAYQ 1560 ESTIICVVDA FRAAVQMGAV IDGEFISHDR LCRMADCFRL

Sequence ? help Back to Top

Protein Sequence Length: 1600 aa Download sequence

MEGSSFEEIT AVPSTSQARQ ERLTRHINVL RRLLALLSDP DRTPPIIPJR LGTSTRVYRA  60
LWDSGSQGDF VHPRVVEEAR LATSGSRSHI SVTLGDNKTQ RFFDQTVPDL HFSLTLQPPD  120
STQAPRRYHS SAYFDVLETG YVFILGTPWS RRFRSTEAEW AFETLILKMK CGQTHRVPFI  180
GTTGDTPPNL PPQDPRSSGS HPDISFTSPR QFAHFIRQED VTLYSVNVMD LLRYDPLCPE  240
VELISLEPDP PDPSSIFAAP ISTSTPQPAD TPSTSQVPTP STAESTHTSC ANANVEELMR  300
FTTDLEPVIH DLIREYRDVF PPYFSYSGIP PMRGVEHSIQ LVPDYRVHHQ APYRLLIPEA  360
TELKRQLEEL LRLGFIKPSN SPWGAPVLFA RKADGTLRLC IDYMTGITSR GSKDPSNPRD  420
GSGSKDGTDQ KEKPVQKENP KDGEGSGNNE GSVSGEEGKK GTEGKDGSDP AAGLDPKSVT  480
SQQVLKDQAE PVNEGEDAGK KGVMREKEAD PNPFPPAARK QDPKKGGLKA VGKNKREETT  540
GEQTEVTKSQ YVEKEKDIAE KGEVEMERSI EEEPTPKEKD PQNERMVEGQ GEGQERQNEA  600
NDPKGKADMS EVARAQLGLV VNLMADVGRR LPLLVLVVVV FLLVVFLHVC LSWRPWKQHR  660
KRRASTKRSA GERTMAGMQG RVGVGADEGG RRPAMAEPRR RYDPSMYAHL QSWETPLPLS  720
DEEPETEELP TLPLASGWTH LWSQTVRAGG SGFNEGGEYT SLPQQGLGDD DDGGLDLRFG  780
LCSGGSKEAS RTLIIDIDRS PRGVERGGSQ LLRRLGSTAP FADRSTSNWP AHNGATVGSP  840
CIDCARPSMP ERTTPTQSDV RDAGASRLLV RPVPTVENIT RGVSNIRAHS DGDDDDCFGG  900
DDADERLTED VDAGDDDEDI PVRPLGKTGG RGRPRSRGAV RGRSVDRGDR GCVSEDAGKS  960
VTYWFPEEQL QLVRCKREQE MHLAGMGHNY RQMRTKEWKW DDIAKRMVSA GKPKDADDCM  1020
KKWDNLFQNY KKIQRFQNAS ASRRGGGGGE SVGSEAGGEG FPEERSSARE SENNAGSGAX  1080
GXKXKNXXQQ ALESIADVMD RHGELMSSTI ESSSKRQCSI FTRQCDILEQ EVAVQKEHYA  1140
ASNKTQRMMC HALMEIVVAI RGRTTIFQRS GMLRRGWSTA IRSLQICAPE VARLSSPTAR  1200
GTGRGKKREG LPDDNQVTGK ARRHVPKAKR LRSDDASTRV PLGGAQGWAA EAGGDYDDDF  1260
ATDEDQAHAT ASGVRESGGK RQSDHSASKR LMTPPPEKKQ VRARDRRTYD AEVDELGDDD  1320
NEPLERRRLR SRTAATPPPA ASGHTLAGET TVMGRLPATT AAPRPRNTAA EGGSVQRGGG  1380
GVVAVHTGAV GVEVAGAAGA VAGVSGSAPP VAAAREEGAV VAMARDDERG EKRSDREGGE  1440
AGSNRPRRGV TRIAKIADPS QLQQATSRAS AVENIALRVL HGWVFKSGNR PRGYNLAFQY  1500
ALESVVTDIA RAMWYDEEWC NVVSPAVCAH TIDLSMDLPL WFAGVKVENR PDGDDMAAYQ  1560
ESTIICVVDA FRAAVQMGAV IDGEFISHDR LCRMADCFRL