PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83651.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 414aa MW: 44346.3 Da PI: 7.9094

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.7	4.5e-11	191	271	1	76
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 rW ++e L ++r+ e+ e+l+r++lk++ W+ v ++mre+g++ qCk+k+ ++ y+k+k++e+ s++ GBG83651.1 191 RWGEEESTWLCKFRNevkglmgEDSESLGRARLKAGFWKVVESRMREKGYNQDHDQCKSKFHQIFDFYRKLKAHERW--SGNP 271 79999999999999944444444444444567******************************************986..3444 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MAEGQSSDAI PFPVQGQSTS SPRTDLPGSV SAAVSPVPSP SCVNSGTHSL NVGCSTPPAV 60 LARPGGRTCQ TPQSGVSQGI GGQQPDDRTP GSEYILNRLL REVEAGGGTM EGCAGTGAGR 120 NVNVSPVSGT RTAPQDVLSH VCGRQSVSPP PGHGGSQTTP SNAQNAAGTS VDSRGKGAQA 180 QPTAPEKNME RWGEEESTWL CKFRNEVKGL MGEDSESLGR ARLKAGFWKV VESRMREKGY 240 NQDHDQCKSK FHQIFDFYRK LKAHERWSGN PSYWDMNSTT RKRYNVDFVI RRSWYDSISS 300 SEGDTDSIRL SNLRDSGSEQ ERMEDGDGDT GGVSEDGGVG PPALPVAQGL VLSILRWANA 360 NELSAMLVKI ACGQLLELCV TIAQRLRRLI DSVRSCAVIQ HLMSPASRRI SRGS

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MAEGQSSDAI PFPVQGQSTS SPRTDLPGSV SAAVSPVPSP SCVNSGTHSL NVGCSTPPAV  60
LARPGGRTCQ TPQSGVSQGI GGQQPDDRTP GSEYILNRLL REVEAGGGTM EGCAGTGAGR  120
NVNVSPVSGT RTAPQDVLSH VCGRQSVSPP PGHGGSQTTP SNAQNAAGTS VDSRGKGAQA  180
QPTAPEKNME RWGEEESTWL CKFRNEVKGL MGEDSESLGR ARLKAGFWKV VESRMREKGY  240
NQDHDQCKSK FHQIFDFYRK LKAHERWSGN PSYWDMNSTT RKRYNVDFVI RRSWYDSISS  300
SEGDTDSIRL SNLRDSGSEQ ERMEDGDGDT GGVSEDGGVG PPALPVAQGL VLSILRWANA  360
NELSAMLVKI ACGQLLELCV TIAQRLRRLI DSVRSCAVIQ HLMSPASRRI SRGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.3	3e-08	Trihelix family protein