PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83588.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

GATA

Protein Properties

Length: 1293aa MW: 145113 Da PI: 8.5677

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	45.9	7.6e-15	7	40	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +Cg+t+TplWR+gp ++ LCnaCG ++r +g GBG83588.1 7 CGHCGVTTTPLWRNGPPDKPVLCNACGSRWRTRG 40 9*************55555********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 1293 aa Download sequence
MGKSGPCGHC GVTTTPLWRN GPPDKPVLCN ACGSRWRTRG NLTNYLPASL GGSGHGGGYY 60 ARGSKSAWCK SSKENCRKTN SSNTSLIVKV TQAKQLSASS TTTCWTGEHL QNRVSPWKGH 120 DWRKGDAAAT VENNGALVKR PRLPTSCGRC DTDVADNTSR TPFTSPVTVA SLESIPCMRR 180 SNDAVELADE REQFAGNMFC RIVEALLVAQ REQMQYERSQ DIKIDAIRAG FKDFACDMMK 240 HLLTEVHIAI NRTRELCTGF IEGAKLAAPK EEEPTPPRRE KVKVRFPEPF SGKKGEDFDN 300 WEANVHSYMY LQGVTPEDHT LVGFQVLRDE ATSFARSLAR AANCDNDMVT YSRLTPLSVF 360 LKALRERFSD VTRGLKAPDK LQMIHTRQWK SVHALKSAMD ELIAVPGHGV TDVQLLNLFY 420 RALPENIQGH FFEKKNKQGM THDTLSWEAV AFAAQASPVT TFWHKDLSKG KTLKGCAISG 480 QIKAKDSLIL TMEEGGAEEV PYSDIEWGLE EDNNASQGRT YAVVAAGGRP QGGQRFGPSG 540 RAQGGRGQGG QGVGGYGNRQ AGGRGGPPSN RPRQRLVSCP ELACVRASLG ASLTGLADEL 600 RERRQAWAKM KKDSKGKLIL ADVEIFRAGV GALIDIGATR SFISRKALRK LKLNLKVQRL 660 EEPVVSILAD NSRMRVEEYV EGVHACFRLE KDGKVEKVLH SLTLLVEESL PFDIVLGTDW 720 GEAVGATLHL REHECTLPCA SGEVKKVRLF HESGVDNPLA HCCLSAPAFA RLVRKEQLEE 780 QVFVVYVRPV SDQPIEEEKI HPAIASLLEE YKDLYEPPSG VVPKPIQHRI EIEPGSRTPE 840 GPVYRMSPKE LEELRRQFDE LLEKGWIRPS SSPFGAPLLF VPKEEGELGM CIDYRGLNAI 900 TIKSPEPLPR IDDLLDRVQG CKYFSKIDLK SRYHQIEVHP DDQYKTAFRT RYGHYEFIVV 960 PFGLTNAPAT FQCCMNDLFR PWLDRFVVVY LDDILVFSKT LEEHEGHLRQ ILSKLRESNF 1020 KINPKKCEGD KTQVLYLGHV LDGDGIRRED SKIASIRDWP TPKTLTEMRS FLGLANYYRK 1080 FVRNFSTIAA PLRRLLKKEA IWKWDQDCTS AFKKLKKALI EYPVLKVVDP SLPSVVTTDA 1140 SQYGIGAVLQ QDDGNGYRPV EFMSARLPSE KVAASTYERE LYALRQALEH WKHYLLGRHF 1200 KVYSDHETLR WLKTQAKMTP KLTRWAAEID QYDFELKPVK GKYNVVADVL SRRSDYFGAV 1260 VHYLDIGADL QQKVRDAYAQ DPIYGELLCC SKE

Sequence ? help Back to Top

Protein Sequence Length: 1293 aa Download sequence

MGKSGPCGHC GVTTTPLWRN GPPDKPVLCN ACGSRWRTRG NLTNYLPASL GGSGHGGGYY  60
ARGSKSAWCK SSKENCRKTN SSNTSLIVKV TQAKQLSASS TTTCWTGEHL QNRVSPWKGH  120
DWRKGDAAAT VENNGALVKR PRLPTSCGRC DTDVADNTSR TPFTSPVTVA SLESIPCMRR  180
SNDAVELADE REQFAGNMFC RIVEALLVAQ REQMQYERSQ DIKIDAIRAG FKDFACDMMK  240
HLLTEVHIAI NRTRELCTGF IEGAKLAAPK EEEPTPPRRE KVKVRFPEPF SGKKGEDFDN  300
WEANVHSYMY LQGVTPEDHT LVGFQVLRDE ATSFARSLAR AANCDNDMVT YSRLTPLSVF  360
LKALRERFSD VTRGLKAPDK LQMIHTRQWK SVHALKSAMD ELIAVPGHGV TDVQLLNLFY  420
RALPENIQGH FFEKKNKQGM THDTLSWEAV AFAAQASPVT TFWHKDLSKG KTLKGCAISG  480
QIKAKDSLIL TMEEGGAEEV PYSDIEWGLE EDNNASQGRT YAVVAAGGRP QGGQRFGPSG  540
RAQGGRGQGG QGVGGYGNRQ AGGRGGPPSN RPRQRLVSCP ELACVRASLG ASLTGLADEL  600
RERRQAWAKM KKDSKGKLIL ADVEIFRAGV GALIDIGATR SFISRKALRK LKLNLKVQRL  660
EEPVVSILAD NSRMRVEEYV EGVHACFRLE KDGKVEKVLH SLTLLVEESL PFDIVLGTDW  720
GEAVGATLHL REHECTLPCA SGEVKKVRLF HESGVDNPLA HCCLSAPAFA RLVRKEQLEE  780
QVFVVYVRPV SDQPIEEEKI HPAIASLLEE YKDLYEPPSG VVPKPIQHRI EIEPGSRTPE  840
GPVYRMSPKE LEELRRQFDE LLEKGWIRPS SSPFGAPLLF VPKEEGELGM CIDYRGLNAI  900
TIKSPEPLPR IDDLLDRVQG CKYFSKIDLK SRYHQIEVHP DDQYKTAFRT RYGHYEFIVV  960
PFGLTNAPAT FQCCMNDLFR PWLDRFVVVY LDDILVFSKT LEEHEGHLRQ ILSKLRESNF  1020
KINPKKCEGD KTQVLYLGHV LDGDGIRRED SKIASIRDWP TPKTLTEMRS FLGLANYYRK  1080
FVRNFSTIAA PLRRLLKKEA IWKWDQDCTS AFKKLKKALI EYPVLKVVDP SLPSVVTTDA  1140
SQYGIGAVLQ QDDGNGYRPV EFMSARLPSE KVAASTYERE LYALRQALEH WKHYLLGRHF  1200
KVYSDHETLR WLKTQAKMTP KLTRWAAEID QYDFELKPVK GKYNVVADVL SRRSDYFGAV  1260
VHYLDIGADL QQKVRDAYAQ DPIYGELLCC SKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47140.1	2e-23	GATA family protein