PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83529.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 801aa MW: 88350 Da PI: 7.5739

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.1	2.5e-09	8	58	19	69
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 ++++r k k+ +We+ sk+m+ +g + + C +kw+nl + ykki++ ++ GBG83529.1 8 HNYGRMKTKEWKWEDMSKRMANEGRPKDADDCMKKWDNLFQNYKKIQRFQN 58 67889999*************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MHLAGLSHNY GRMKTKEWKW EDMSKRMANE GRPKDADDCM KKWDNLFQNY KKIQRFQNAS 60 GRPDFFRLTN KERKEHNFKF RMDRALYNEI HAGMVGNRTI FPPNVADTGS PVGVQLPRRG 120 AGGGESVCSE EAGEGCPDER PSARESDSNV GSGAGGGKRK NVRQQAFEFI SDVMERHSAL 180 MSSTIESSSK RQCSIFTRQC DILEQEVAVQ KAQYAASDET QRIMCQALLE IAAAIRGRST 240 IAARPEPHKC SPHEGDSTTL LAVPGAHFPP RICSATTLLA GRATRFPSRI CSATTLLAEP 300 APHFPPRISS ATTLITVIAS ALLAVSLLAA EHSRHRQGQV LPGTSSFRGA LGPLYRDRLR 360 GSPTSMSARL NARGKKRDVT LDETQAQGKG RRHVSKAKRP RLDDASASMP HRAARGSSQP 420 VEEDNDDDFM TEEDQGEATA SAGRESARQC TADQSASKRM STPPPEAQQL RVHETWKEKG 480 DVVDLGGEDD EPLERRRVRS ATQATTTAVS TARAADDERP ITGALPCTPS QPRQRNDGGD 540 DQSQLQQAIS RAAAVENIAL RILHGSVFKS RNRPRGYSLA FQYSLESLAT DIARAMWYGE 600 EWRNIVSAPI CAHTIDLNID LPLWYAGANI EDRPEDDDMA AYQESTVISI AHSFRAAVQM 660 GTHIDDDFIS YERLCRVANC FRLLLAASMW IMRMAGDDPR SHYEAFYFAD LVARPTLIAS 720 MHRSFDHRRS VVRAVNVVTE RLGKAKVTLG VYPDYIPDWA PCGIGFAHDA TIKGPEDAKM 780 PDWLGSGPAD DDIKGEGKDD A

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MHLAGLSHNY GRMKTKEWKW EDMSKRMANE GRPKDADDCM KKWDNLFQNY KKIQRFQNAS  60
GRPDFFRLTN KERKEHNFKF RMDRALYNEI HAGMVGNRTI FPPNVADTGS PVGVQLPRRG  120
AGGGESVCSE EAGEGCPDER PSARESDSNV GSGAGGGKRK NVRQQAFEFI SDVMERHSAL  180
MSSTIESSSK RQCSIFTRQC DILEQEVAVQ KAQYAASDET QRIMCQALLE IAAAIRGRST  240
IAARPEPHKC SPHEGDSTTL LAVPGAHFPP RICSATTLLA GRATRFPSRI CSATTLLAEP  300
APHFPPRISS ATTLITVIAS ALLAVSLLAA EHSRHRQGQV LPGTSSFRGA LGPLYRDRLR  360
GSPTSMSARL NARGKKRDVT LDETQAQGKG RRHVSKAKRP RLDDASASMP HRAARGSSQP  420
VEEDNDDDFM TEEDQGEATA SAGRESARQC TADQSASKRM STPPPEAQQL RVHETWKEKG  480
DVVDLGGEDD EPLERRRVRS ATQATTTAVS TARAADDERP ITGALPCTPS QPRQRNDGGD  540
DQSQLQQAIS RAAAVENIAL RILHGSVFKS RNRPRGYSLA FQYSLESLAT DIARAMWYGE  600
EWRNIVSAPI CAHTIDLNID LPLWYAGANI EDRPEDDDMA AYQESTVISI AHSFRAAVQM  660
GTHIDDDFIS YERLCRVANC FRLLLAASMW IMRMAGDDPR SHYEAFYFAD LVARPTLIAS  720
MHRSFDHRRS VVRAVNVVTE RLGKAKVTLG VYPDYIPDWA PCGIGFAHDA TIKGPEDAKM  780
PDWLGSGPAD DDIKGEGKDD A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	4e-06	Trihelix family protein