PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83372.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 823aa MW: 87952.5 Da PI: 7.5369

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.8	1.6e-09	359	434	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegek 69 Wt ++ aL++a+r ++++++r k k +W+++ +++ + g+ +r++ C++kw+nl +++k + + ++ GBG83372.1 359 WTVEHMIALVRAKRdqdlhlaGLGHNMGRMKTKTWKWADIESRLVQMGVtTRKADDCEKKWDNLYMQFKIVHKFMG 434 9***********77777777778888999*********99999799***************9877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 823 aa Download sequence
MADLCRRLPL LLLAAVLLLV VVVFHICILG RVPGRKHRRR TTKATGKMEK VQTKRTISVG 60 AGGSSRQHCS SAEGGRRPYD PTLYSHLPSH EIPLPPSDDD SDEPRSSTVP LGSGSTQDWM 120 GSQLYRQPST PTYTDLLEGR TPVGYDGGLV DLSFGLRSGS GQDVMHTVLV NPGSASNHTA 180 PSVGLCGLLD TRGRGSGQSG DERGLVSQGR TAVGTAGVRA EGTRTGGSTT AGGAVHRGGD 240 DADGYAAEVA GREVWDDYRR QSRQSSTLAI TRGVAKINVR ADDTPDDCHR AGGEDLSEGD 300 GGNDNDDDDD GEMEICPLGK KRGGPRATSK SSEPRAGRRG KKTAGDALAG DGAKSRDFWT 360 VEHMIALVRA KRDQDLHLAG LGHNMGRMKT KTWKWADIES RLVQMGVTTR KADDCEKKWD 420 NLYMQFKIVH KFMGESGKPD FFSLAPRERK ERGFDFRMDE RVYSEMMAMS KGDHTIHPMN 480 LADTGVAGGV QLAGRTGGRN ESGGSDGCGD GQDDDQGSTR NSSFSGGAVG GCGKRKNVRQ 540 QTFNTIADVM KHHESLMATT VDSASERLPA RRSGDGGRAR YFSGAAIGFR ARWVDEGTGV 600 RCETEHCCWC CRGVAKDLEG GSGCHNGGAR PEATSRGDGE GPATSATSTA TVGGFGGGKA 660 QPAQKGDATA IGTRTAAADR SGRTRVAEGA GEERVDDVRN DVRHDEGRRD GKREGDDDDD 720 RPLVTRLKGD AKEDGLEERS KLWVDCDSFW GQGPGKPLRE AVGECADYFI AIANGDAGAE 780 PPAMLILPPN DVPRFKIDNP AQRGPALRRA RNVEKLVLRV IHG

Sequence ? help Back to Top

Protein Sequence Length: 823 aa Download sequence

MADLCRRLPL LLLAAVLLLV VVVFHICILG RVPGRKHRRR TTKATGKMEK VQTKRTISVG  60
AGGSSRQHCS SAEGGRRPYD PTLYSHLPSH EIPLPPSDDD SDEPRSSTVP LGSGSTQDWM  120
GSQLYRQPST PTYTDLLEGR TPVGYDGGLV DLSFGLRSGS GQDVMHTVLV NPGSASNHTA  180
PSVGLCGLLD TRGRGSGQSG DERGLVSQGR TAVGTAGVRA EGTRTGGSTT AGGAVHRGGD  240
DADGYAAEVA GREVWDDYRR QSRQSSTLAI TRGVAKINVR ADDTPDDCHR AGGEDLSEGD  300
GGNDNDDDDD GEMEICPLGK KRGGPRATSK SSEPRAGRRG KKTAGDALAG DGAKSRDFWT  360
VEHMIALVRA KRDQDLHLAG LGHNMGRMKT KTWKWADIES RLVQMGVTTR KADDCEKKWD  420
NLYMQFKIVH KFMGESGKPD FFSLAPRERK ERGFDFRMDE RVYSEMMAMS KGDHTIHPMN  480
LADTGVAGGV QLAGRTGGRN ESGGSDGCGD GQDDDQGSTR NSSFSGGAVG GCGKRKNVRQ  540
QTFNTIADVM KHHESLMATT VDSASERLPA RRSGDGGRAR YFSGAAIGFR ARWVDEGTGV  600
RCETEHCCWC CRGVAKDLEG GSGCHNGGAR PEATSRGDGE GPATSATSTA TVGGFGGGKA  660
QPAQKGDATA IGTRTAAADR SGRTRVAEGA GEERVDDVRN DVRHDEGRRD GKREGDDDDD  720
RPLVTRLKGD AKEDGLEERS KLWVDCDSFW GQGPGKPLRE AVGECADYFI AIANGDAGAE  780
PPAMLILPPN DVPRFKIDNP AQRGPALRRA RNVEKLVLRV IHG