PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83264.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1408aa MW: 154026 Da PI: 7.4991

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.9	7.2e-10	725	800	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + aL++a+r m++++ r k ++ +We+v +++++ g++r + C +kw+nl +++kk+ +g++ GBG83264.1 725 WSVGYTIALVRAKRdqdlyfvGMGTTFARMKMREWKWEDVRARLQSMGVTRDVVDCGKKWDNLMQQFKKMPAGAGA 800 88888999999999999999899999*******************************************9887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1408 aa Download sequence
MKCLSTFKLD HVPGVLVLEL KMSMRLLKVL KALRTIPMDV LFDDDRDPCL KSQRGEGEGI 60 ARALSQTRNC ATVLDVPDDS NPSPPVARVP HPRAYLSHWF DNAKKVGLRK VLNEIFFEMF 120 VKTATVVKDE GIWKKFLDWQ RTKLTDMRSE RGSSLLSNPL NISDVESSWM LQSLLHDDYI 180 ALPNEEIARM TFDLPYCPMD GTIPEPFFRY ARIQSLIKRI HVGVASSALP SATVRPLSLP 240 APSPANYQRL ADYASPSNVG TPIVTASTVV SASPAAMFTP SPAPCVVPAP VSPAAQLHVR 300 TGGLTEVTTY TFDIAVYESL ASVGPKKVHA HLSYLDSSHR LQDITQAAKE MHTDMNTWKS 360 VDAAIHPDYH RQRQSGFQTF EDYCPKVLQQ SSIRDMLRER RSSKKANRTD RRLGNGRPAG 420 TTSRASSQQH CAGFVAKRPY DPRLYAGLPS HEIPLPPSDD ERGDARSSTL PLGSGSTLEW 480 AVTQSCGGRR VETPWSSTSL VNEGLCNDDG NAAVDLSFQL SSSSGAAATH TRIINPHPGV 540 DCADNTHGGV CGPRDGGLPQ SLREGGGNRN ESTSTVGGGV GARERPEWMR LSPASRSGFG 600 APSGQQRPED LRQEGADVHR DGRQLWAECR QALHQRGTKT ITRGVQRLHV DEGDEAAVEE 660 AQGCDDVDGD DDCNSDDLPN IRPLGRKAMN GGATARKGPA TKSRRSKKMD DDTSRSDGEG 720 GRNLWSVGYT IALVRAKRDQ DLYFVGMGTT FARMKMREWK WEDVRARLQS MGVTRDVVDC 780 GKKWDNLMQQ FKKMPAGAGA ARDTMATDGG GEAADEQQGS TKDSTFSAGS GSGYGKRKNI 840 RQQTFEVVAE VMDKHGALMA STMDSASKRQ SSMMLHQCEI LESEVEVQRK HYAAADEANR 900 MMCSKRRPLT EAGSMSTRGG ARGKKWENIP ADIQGRERGR RHVSKAKRLR SEETSASLPL 960 RRGRSWTAAN EEEDDDVFTT EEEAAEDNAP GLRGNTLQRS SDHSGARRLV TPPPEAQQVR 1020 AHNTQKAKEV VVDIGGEDDE PLKSRRQRNA TQAATATTVR ILAPTKERPP QGGLPSTSSQ 1080 PRPRNTAAEG GSMECGGGEG GQQEARVAGR GAIAAAAAGS SGNVGVVARA REEVPVVEWK 1140 ATRGNNKGER EDEDPLLSRV RRGGMARDLA DRARLWSGNR PRGFNVAFQY ALESVATDIA 1200 RVMWYGEEWS KVVSAAVCAQ LIDLNMDLPL WFVGAHIEDR PEDDGMAAHQ EATVICIAHA 1260 FLAAVQMGGI VDSGFISHDR LSRIVDCFRL LLAACMWLMH MAGDDPCSHY EAFYFAKLVE 1320 KPTLVASIHR AFDHRRSVIR AMNVVTERLG KANATLGESL KYIPDWASCG IVFGHDATIT 1380 GPENAKRRDW LGSGPLEEND HDDGKEDA

Sequence ? help Back to Top

Protein Sequence Length: 1408 aa Download sequence

MKCLSTFKLD HVPGVLVLEL KMSMRLLKVL KALRTIPMDV LFDDDRDPCL KSQRGEGEGI  60
ARALSQTRNC ATVLDVPDDS NPSPPVARVP HPRAYLSHWF DNAKKVGLRK VLNEIFFEMF  120
VKTATVVKDE GIWKKFLDWQ RTKLTDMRSE RGSSLLSNPL NISDVESSWM LQSLLHDDYI  180
ALPNEEIARM TFDLPYCPMD GTIPEPFFRY ARIQSLIKRI HVGVASSALP SATVRPLSLP  240
APSPANYQRL ADYASPSNVG TPIVTASTVV SASPAAMFTP SPAPCVVPAP VSPAAQLHVR  300
TGGLTEVTTY TFDIAVYESL ASVGPKKVHA HLSYLDSSHR LQDITQAAKE MHTDMNTWKS  360
VDAAIHPDYH RQRQSGFQTF EDYCPKVLQQ SSIRDMLRER RSSKKANRTD RRLGNGRPAG  420
TTSRASSQQH CAGFVAKRPY DPRLYAGLPS HEIPLPPSDD ERGDARSSTL PLGSGSTLEW  480
AVTQSCGGRR VETPWSSTSL VNEGLCNDDG NAAVDLSFQL SSSSGAAATH TRIINPHPGV  540
DCADNTHGGV CGPRDGGLPQ SLREGGGNRN ESTSTVGGGV GARERPEWMR LSPASRSGFG  600
APSGQQRPED LRQEGADVHR DGRQLWAECR QALHQRGTKT ITRGVQRLHV DEGDEAAVEE  660
AQGCDDVDGD DDCNSDDLPN IRPLGRKAMN GGATARKGPA TKSRRSKKMD DDTSRSDGEG  720
GRNLWSVGYT IALVRAKRDQ DLYFVGMGTT FARMKMREWK WEDVRARLQS MGVTRDVVDC  780
GKKWDNLMQQ FKKMPAGAGA ARDTMATDGG GEAADEQQGS TKDSTFSAGS GSGYGKRKNI  840
RQQTFEVVAE VMDKHGALMA STMDSASKRQ SSMMLHQCEI LESEVEVQRK HYAAADEANR  900
MMCSKRRPLT EAGSMSTRGG ARGKKWENIP ADIQGRERGR RHVSKAKRLR SEETSASLPL  960
RRGRSWTAAN EEEDDDVFTT EEEAAEDNAP GLRGNTLQRS SDHSGARRLV TPPPEAQQVR  1020
AHNTQKAKEV VVDIGGEDDE PLKSRRQRNA TQAATATTVR ILAPTKERPP QGGLPSTSSQ  1080
PRPRNTAAEG GSMECGGGEG GQQEARVAGR GAIAAAAAGS SGNVGVVARA REEVPVVEWK  1140
ATRGNNKGER EDEDPLLSRV RRGGMARDLA DRARLWSGNR PRGFNVAFQY ALESVATDIA  1200
RVMWYGEEWS KVVSAAVCAQ LIDLNMDLPL WFVGAHIEDR PEDDGMAAHQ EATVICIAHA  1260
FLAAVQMGGI VDSGFISHDR LSRIVDCFRL LLAACMWLMH MAGDDPCSHY EAFYFAKLVE  1320
KPTLVASIHR AFDHRRSVIR AMNVVTERLG KANATLGESL KYIPDWASCG IVFGHDATIT  1380
GPENAKRRDW LGSGPLEEND HDDGKEDA