PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83062.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 447aa    MW: 46704.6 Da    PI: 6.6292
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.92.6e-08212290276
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                 W+ +e   L ++  e++    r++      +++ ++e++sk + e+g++rs + C++kw +l  + k+i++   +  s+++
  GBG83062.1 212 WSPDEQISLARLFGEDDALCARASgphkclKRGERLEWISKCLGEEGYRRSGEDCRKKWASLLEKVKEIADKCDR--SGKQ 290
                 6666666666666666666666544455557799*****************************999999998776..3444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MPPSRAQSSF EDLLGSSTDE RHSAAMGQVP REYSSVPWGS MLTTSLPPPP TWRNNPAAQA  60
FVHSNIASSI PAPPMMPFSG YGVPGVDGNV GHGGTAYYQP SRAHFRASVP AVDGASAGPR  120
GLNVRNDAPA VSSARGTRSM DCNSPAMATE HMEEAAAPLA HAQGPPVQAS AVDLSAAEEC  180
GDGPDLTTDS PPDESGGRKP PAKPSRKASQ PWSPDEQISL ARLFGEDDAL CARASGPHKC  240
LKRGERLEWI SKCLGEEGYR RSGEDCRKKW ASLLEKVKEI ADKCDRSGKQ TYWDLTTEKR  300
RELGSSVDDV ASGRSGGGEG SAGAIGGKRN VRDPSDGSDG GTKTRRTGSG KVRGNGDDES  360
SSLVSKAMEE STRAYCDGLQ QAASTLAKAS TKGAEIVGVR IGEMAGKIGA VADAMVGSND  420
VLSQLVGVLA GRRQGTRRGE WAGDESP