PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82645.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 297aa    MW: 32758.2 Da    PI: 6.6307
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.59.4e-1072142265
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 
                 W+ +e l+L++ +re e +l        + + k  +W++ +k+m++ g  + +  C +kw+nl + ykki+
  GBG82645.1  72 WSPEEQLQLVRCKREQEMHLAglghnygQMRTKDCKWDDFAKRMASAGKPKDADDCMKKWDNLFQNYKKIR 142
                 **************777777633332225679*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MRAHSDGGDD ADERLTEDVD AGDDDEDILV PPLGKTGGRG RVRSSGAVRG RSVGRGGRGC  60
VSDDAGKSVM YWSPEEQLQL VRCKREQEMH LAGLGHNYGQ MRTKDCKWDD FAKRMASAGK  120
PKDADDCMKK WDNLFQNYKK IRWFQNASGR PDFFGLTNEE RKEHNFKFRM ERALYNEIHA  180
GMLGNHTIFP PNIANTGNPD GVQLPRRGGG GGESVGSEAG GEGFPEERSS ARESENNAGS  240
GARGGKRKNA RQQALESIAD VMDRHGELMS STIESSSKRQ CSIFTRQCDI LEQEVAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.14e-06Trihelix family protein