PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82575.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family NF-YC
Protein Properties Length: 277aa    MW: 31140.7 Da    PI: 6.6312
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC1789.2e-56661701102
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie+a+dfknh+lPlarikki+k+dedv+misaeaPvl++kace+fileltlrsw+h+eenkrrtl+++dia a+t+tdifdflvdiv
  GBG82575.1  66 QLQVFWNQQmaeIEQANDFKNHQLPLARIKKIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWIHTEENKRRTLQRNDIAHAITKTDIFDFLVDIV 164
                 89******98888************************************************************************************** PP

       NF-YC  97 prdelk 102
                 prd++k
  GBG82575.1 165 PRDDIK 170
                 ***975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MTMMGAQAQL QYPGMGQQPQ LGPPMPTQYQ QAPAGGQAAQ TQLQGPAYPP AALQHYQHLQ  60
AQHRQQLQVF WNQQMAEIEQ ANDFKNHQLP LARIKKIMKS DEDVRMISAE APVLFAKACE  120
MFILELTLRS WIHTEENKRR TLQRNDIAHA ITKTDIFDFL VDIVPRDDIK EEGLSVSRPP  180
VPLPPAGDSL AYPGMYYMQP QPAAAPQQPQ QMMQAPAMMV GRPAMPMDPS MMYQQAQVRG  240
PVQYMQQQPQ ALQQMWHQQP QMPTGQDGSQ TGMAPSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139145RRTLQRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.21e-61NF-YC family protein