PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82423.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 336aa    MW: 36940.9 Da    PI: 10.3209
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.93.1e-14160249185
    trihelix   1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                 rW ++e+  L ++r+       e+ e+++r++ k++ W+ v ++mre+gf+r ++qCk+k++++   y+k+k++e++  s++ s + + + +
  GBG82423.1 160 RWAEDETTWLCKFRNevkglmgEDSESMGRARVKAGFWKIVESRMREKGFNRDQEQCKSKFSEIFDFYRKLKAHERR--SGNPSYWDMNSTM 249
                 8**************55555555555555567********************************************8..5777778776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MRILETLSTN DVAATLFCVF LFSFYGVHIG VDFKTSRGGG GRFQDFAPFG KAPLRALRAT  60
KKRKKSECLH SFRITWRTVD GGAGTGTPGN INVSPVSDTH TAAQDAPSHG SGRRSVSPVP  120
DRCASRSTTS NAQSAGRNAV DSRGKGQAAR PPTPQRNTDR WAEDETTWLC KFRNEVKGLM  180
GEDSESMGRA RVKAGFWKIV ESRMREKGFN RDQEQCKSKF SEIFDFYRKL KAHERRSGNP  240
SYWDMNSTMR KRYNIDFVIR RSWYDSISSS EGDTDSIRLS NLRDSGSEQE RMEDGDGETG  300
GGSEDAGGGD AGPSGGTRSG AFSPTLGKRK RAVSNA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16165KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.31e-09Trihelix family protein