PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82405.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 499aa    MW: 55197 Da    PI: 9.7253
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.39.7e-0967143270
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 
                 Wt ++  aLi+a+r+ + +l        r k k  +W++v k++ + g+ +r+ + C +kw++l +++k + + +++
  GBG82405.1  67 WTVDHMIALIRAKRDQDLHLAglghnsvRMKMKTWKWDDVEKRLVQMGVmSRKVEDCGKKWDSLYQQFKTVHKLMGE 143
                 **************777666644443336789999*********9999889*******************9988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MFCLGWPAAV LLLAIVVFRI MEIRPIGRKR GGSRATNKST EPRAGRRGKK GAGDTSAGEV  60
AKSRNFWTVD HMIALIRAKR DQDLHLAGLG HNSVRMKMKT WKWDDVEKRL VQMGVMSRKV  120
EDCGKKWDSL YQQFKTVHKL MGESGKSNFF TLTPRERKER GFDFRMDECV YSEIKAMSRG  180
DHTIHPTNLA DTGVAGCVQM PCPRGGRNES GGSEGCGDGQ DDDQGSTRDS TFSGVGGGGG  240
GKRKNVRQQT FDTIADVMKD HGNLMATTVD SASKRQCSIL TRQCDILERE LEVQKEHYVK  300
ADQANFMMCN ALLEIAKAIR AVSSPVRRTG GLRTARTDGR TDARMGVRTT TGPGKPLREA  360
AGDCADYFVA IANGDVGAEP PAMLVMPSND VPLFKIEDPA HREPALRRAR NVEKLVLRTF  420
HGWIFKSSSR STGFARAESY INVDSATDVA RAVWQGYEWS KVVSLALVYH TLAMKMDVPL  480
WFAGVKIVDQ PEDDDMAAR