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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG82161.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | ERF | ||||||||
Protein Properties | Length: 5021aa MW: 529249 Da PI: 5.7186 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.1 | 6.6e-11 | 2565 | 2610 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 y GV + + +g+W+A+ rd n k+ + + lg f+t+eeAa+a+++a+++ GBG82161.1 2565 YIGVKRLP-SGKWLAQFRD---N-KNpACIDLGVFDTEEEAARAYDEAARR 2610 88***999.7******888...3.379*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 5021 aa Download sequence |
MGKLNWKRKG GGKGAELTTN KKSRLVVKGI DDGNNNNNGA NDEKVVDSVR EARGRGRQES 60 ADVKRAGGVG VVGVRADGRE TDEEEGPAVD SGKKHHVRRE DVSEANTQRV TRQSTRLEAT 120 GDGVRGHGKG MKKRGTDDDA GRNCGVEAVE GAGAAGGNER VTRQTVRLRN QGIASSHSWQ 180 APNALAHVAA DKRASSGNGG GRCRGSIRGR EDDRGGLMDQ SDVGSRAGRA RGASDGCAVA 240 VTKRAGKKRR EAFPARLGDA GQRRRLLLVE ESDEEAKDED EDEEDEEEAE EEEAEAKQTE 300 EGEREGEEVE EEAEANQGEA GKEEVGDKET GAVGKEEREG EEEEIKRRHD IEKSPRRRAG 360 QASSRRTADA KVVRGGLRAA SPLEVNRDAS PSEVNRTAKR KKGGKGDCMS PSLTSEKDCR 420 LRKRSPARRL EMSCDGLGTI KHRSSPRKSI DGRSDGDDGA CRDDDDDAEE RALIEDEEGE 480 EAHGRDYHSE AREEEETPHS DAAFACSPVL SSPSAGMRAS KGPPAGLARE RKKRVFGQGS 540 RLPAAAGRDE LSNDGQSPDF VESAKLRTAS ARDDTDAGES SEASLSGGRM ADARVKKVQG 600 EDDHPWKRKE KASQGVEGSD HGDEEKSGGT AGAQRDRDVE PGSRGRDAAS MDGNVINNVV 660 GSEVKIGAGG IRKEHVSRTE RGREVGVLAG TAPLAVLAGV KGASLSPTDV AGRRARLRPT 720 GRRISSRSGH STVVEESPRP EVEAAAELPV ARLEVVRRRL RPRRADGSAG IVETEQIATS 780 PPLASASPPL GGTQTEAGGA CVPRQQASLP CDDGSKIPSR NSKAGAPPEE IDFREPPTTS 840 VRAEVGNGGN GGGGGGGSHH DCSPADAEDV AAGGGDNASE AARGRSHANQ QHQHPPFLTP 900 PVTYRRRGTA GSSPPLASPG GTCGSTAAGS GKPAKTTALS SVATGGPEHP ASSLPRPPTT 960 QGVQVEAKLE GKEGERQQPR TEEEKEKGGD GRRPGKVSKE VKEVGKEDER EEEDKEEERE 1020 EEDKEEERQE EDKEEGREEG KKGQERKAEE DEEKEVEERK EAKEEERKVD EENEKEVEGK 1080 EEETKEAQEE ERKEEEEGKE KEREQEKGEK TGKDGEEILK EDEDEIQEFG GVEEKGIASH 1140 EKPEEGKEEE EEEEKNKDDD DVFTGGDDKQ RNWRSSATPR NLSKDDFSPE ADAHGPIGGG 1200 PGESSVFTDV AIAKSLPCLD SEEALGIMVD ELTCAVIKNT ATATAAATVD IKDHVGATCS 1260 PHSRPQKILR GNSLKKSKST SSSSTPAKKA LQALAADDNT RITRSGGGGG RKSGSGSAPC 1320 RREVEDSVAA NGHPDSSALS DSAKRRLDLE TENIKLPKDG NMLGGSRQQH SRKTRELPER 1380 AARCKRPLVD RVDDGSADED DGCGRYKRRR GQRDEDNFAD DKNANDDERV DDDNDDDKYR 1440 GRDDGGGEGP SEGSGRRQER DRKGAGGGAT FLSAAGIGER AVFAKGSNAT TTRAGGSSGS 1500 GRSVTASRAH GGVKGSKGPS AQVGTVSASA SKWCHRNEEK KGVSGQALGA AAGKKGGMKV 1560 ARTRAAALRD SGGGNETGNE RTSAVIAPPP PPLPPIARCE SKKVLCMSTP FRTFKLCFRH 1620 ILEDPSAPYR QCDYVFPATG ARCTTPVLIN PPEDARFCSA HARMMMMMGS SSRAASSADG 1680 KSTTRPGGAA TPVPPPAPIV SPSLSSGRLT SLASSTVNVS TTVRPDRCSP NPSSPPPLLK 1740 KVKQESVENG NEEGDRMTMR PPPPPPPPPP ASPRPPPLSI SQSGKKRYAA VGIRADDRGS 1800 GVAHHSDHEI AKTEHLPLAS GALAASTTAG GHVGGEAKVV GGDGDDGAED GPSGGQARPN 1860 SRGSAGNAGK VGPRGGDDGK RPMARRRDAV EERVETASGG GAAAGSGDDA CCEKSKKKKW 1920 KDSIVTCSAE RRGAASVARE PMPAKDGTRA GEALVERRVD NGSTRRGKSL GNGADLDEDE 1980 EERGAVDERA GATAAGAERP CLREDDHGND AGDGRGRVEQ EGRAKGIGGL SGKTVVKMEE 2040 GWEAGGGRVT PAGISRVTTH TERMSPAHSA RGRGFSPTFG NNERKADVSG SGRILNNDHS 2100 RVGEHPGLVV SNARESERRR NKVTRVHVKV EDDVGGQPVG RAGSDRGCVE GRKTGGEIPV 2160 KDVKEEERRR HKATQMGMAR REEDGARKTE TGRGTNDRGG LEDESGGQAV RRGLQEGGRR 2220 GAGVEGSVMA QSGKRGGSDE SALGGQGQDG DAAGRRDGCS RQRGAMFAPV GRNYYGVTPR 2280 PWGNFIAEIK DPNGGLCTLL GSFAKEEDAA RAYDREVLRW GRNLPLNFPK ESSRGLENST 2340 KSGSVSRKGG RGAAGGGGGG GDEGVGVGRR GGVGTDTRKE EGGGRGGARD GAGAIGKGGG 2400 GGGVREGGVR EGGGRGGVRE GGGRVVVRED VREGGGRVRE AGREGGGAVL KKVVFVLKGE 2460 TMAEGEWDGE VDPNCKDGEE EPCWSDEEEG EIVGKSSVGS RRRGSARELK CVPPPHSESE 2520 GSRKGERIDR PVTPLTAAGA AERDVKTAKV ASPSASGRVQ YSVNYIGVKR LPSGKWLAQF 2580 RDNKNPACID LGVFDTEEEA ARAYDEAARR RPEENRLLNF PIGKKEEGQG VRSSKSGKNG 2640 EGNWGGERKR RKGRKGRGCL SPARTSPHQC DEGAKSPWRL SPGRTLSLNQ SDEEEDDPDQ 2700 GRNMGVGESS TEGGGGNDGR EVVRGGDPGT GSGSGTRLSE SESGKSRVVL HHEDRPPVVD 2760 GNGARLNKRE RDGEGMKDAG SGCRGLKGSS PSEDRSGDED AVELVGITRG IKCENAKHSV 2820 LCSSGNALGS SRNEAGRRED QGDESERRKE DVEGESVARV GTTADVDSVT RSAESKQKGE 2880 KMVNDGVDEE VRVGCLAEAG EAVSARDAGS DPEGERGKPR KQQIMITSQR MHSPDSRKGS 2940 GQQVSPRPLS SPPPLPVPPD EGPRGKTPDS TRSDSRVEQN PLREDNSGNV CMSPKGTNPP 3000 ERIRELQPPS RLLSGPDAAS PLDVMIMPGS PSNRQCTVRQ IPKAASADSA SAAVGPNQEQ 3060 HPPRLRRRFV GPEMVDHHIG SKEVISPTKP PELLEQLERK NLQHASAEGT PIRRLEDDQG 3120 LVPRSQHDSL VKDQQGRVCH QCSASVVVPS GTAGEVSVEQ QQSLAQQRHT GRMEKGAVAA 3180 AIDGSSQSSG TVSPSSMTKQ SAHPVSRPSV PRYSSRSEEL IIIDDEDHCL PDDRKMAADQ 3240 GRPLAAQERI LTKDAELGSV AVNLQPSEAM STSSPAASME HAGLRSELAA AGCIAAAAQQ 3300 TPPVRLHHHH DQPQQQCMRA PFLSIPQSLA ALQQQQQQAR PAAEQLHHAA PGSVQWIASN 3360 AVAQQQRSGM LSSQRMPAQQ RATIPLSHSE QLAWQILELS SAINRQQQLQ QQQQQQQQQQ 3420 QQQQQQQQQQ QQQQQQQQLQ QQQQQQQLQQ QQQQQLQKHQ QQQLQKHQQQ QVQLQQQQQQ 3480 QLQKHQQQQV QLQQQQQQLQ QLRHHHHHHR HQLQQHVGMP SSVATQAGTI NIQQQRAAIV 3540 SNPQVAGSQR LSGISAAALR QQAGISGGSG GSLRLGHSLG VSTAQQLIAL HRSGGKAMPT 3600 VQVQAPHDTI GTYETRQDLG VGSSGVTTST VDIQNSAEKP TSLYDLAAAG DHLLFKAWSS 3660 QSSAAVVSAS PPPVAVPVES GTQSVMTPPQ LQQGQPDSAG RTTVRQRVTH PLMSPRLVAL 3720 QVPLQPSMQQ QQHPGATMSP ATQPALGGDV QQTAAMGSGL FVVPGNASSA SNPTKVSTVA 3780 AGGGVGIGLS WQALALLQQQ QQQGMTGRQQ QVSDGHKVNV HANMVQRASN QQQMQALSQV 3840 ATVQQILRGS QAEAAAVASA AKALCPNSHH SGHQALSSTQ AQMISPNPVA AAAATASQAA 3900 QAQLQMAAMV RQQQQAGSAT SHIGIATLAE CQMHVPSCAL NPSQCAGPAA SAGLIHQQKT 3960 SHVLQPSESQ THFRVTAASA QSEVHSTGGT SVWLSNLAAG ETPRMAHSSA GPLPSQPQFR 4020 QSRENQQPQP ISPIQCQSTS AAAPNRIVPP GANPQVGRMF ERSAAEGTLF AVPGGGARAL 4080 AGGSESTCRL PVEACGQTSA RVVRSFLSVH QTAALPSLMA RMQQGTPSAA TQLHYTKQGR 4140 SSLRSTGSSD SQKVDNLALF SKKLGLHSLV LGLRSHVCQS APVPGQLQSG DFTGDDDDDD 4200 DGDDDCQIIG ILLQNTYERR TGSMAVPLPP VESGLGRGLS VDDRCQPVAG TFRCATCSLR 4260 IPNLAGDSGL AQEVHEMSTA VPPGMIGLPG DPGGAKDGEQ RDCAAANHES LALLEPTAVG 4320 IGDESFSLLE PMTGAEPFLA SFGRSLDSVV GLAASPKKST ATDPRTGPTA GPSTGSGTGP 4380 STGGGAELSQ GSITGSAEQI LHNGCVESVS REVAAEANSG IVMPSGEGPM DSGVKEIENP 4440 AGRGTGCQLQ PSLDDGNGDW VESMTSVALE FACALEGGEN QPKSKAAADM NANVRHIEEL 4500 GTKSAASQPS GNVDGGAVGK EGSVDLEMEV TVESCATSTL PGEMDSAMCI DKGGAVLEMI 4560 SEMKDVSGIK QLEDCLLEEP ADGSPPENQT DEETGMVACK EVNGKKADEG AEVFADKSSD 4620 RGGEDGEGIE AFTCVARSTN DDKDVKLVES PSKEEVGVCL GEGLDQKGSH GKPNVSELES 4680 TPLEETSLQG QAAADNRECG ESPRESRKGF KEGNPQVDDL VSFLAQEKSG APCQVACAEV 4740 VACGQGSDKE SGTVATPSSV IERVNSEAAD DLAEWGVVSE VVEDPMWENE WGRRAASSPR 4800 TRGGWIEELE DEGAEDMNAS DNVIRQWKQG LVQEGILERH SFTSGAVLEA YKEKADKVER 4860 AVQTIMETAA VDATEQSDVG EAVANVGVKG RDGMALCGNA SVVVSQETEA LEVGSFDGGH 4920 PQVCSVNKAG GGGGPTSGPL SKEQVVPTMT SGLGNGMIRS DEVGAAEDAA ASADNGVTCS 4980 EGSGKVEAHN TCTPVLPFST LRVEVSDKEN REENDVCCND S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 1404 | 1412 | GRYKRRRGQ |
2 | 1737 | 1744 | PLLKKVKQ |
3 | 2349 | 2357 | GGRGAAGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.2 | 8e-11 | ERF family protein |