PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82031.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 307aa    MW: 33717.7 Da    PI: 8.9226
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.16e-1041114268
    trihelix   2 WtkqevlaLiearremeerlrrg.....klkkplWee..vskkmrergferspkqCkekwenlnkrykkikege 68 
                 W+ ++  aLi+a+r+ +++l+++     + +   W++  v +++ + g+ + + +C +kw+nl + +kk+ + +
  GBG82031.1  41 WSVEHMVALIRAKRDQDTQLQASghnfaRMRTREWKSmdVQERLLKVGVDKPADKCGKKWDNLMQHFKKVHAFM 114
                 99*******************86333335778888853378899*************************98755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGGRGGRGST STRAVRRRTR STMTSADAEG EGDGEGGRNL WSVEHMVALI RAKRDQDTQL  60
QASGHNFARM RTREWKSMDV QERLLKVGVD KPADKCGKKW DNLMQHFKKV HAFMGMSGKE  120
DFFQLTSQQR AKKGFNFNMD RAVFEEIKGA RERSHTISPT NVADTGGAGG VQLPSAQSAT  180
PESVGDGEAA GDGNDEDDSS ARGGSQTSGG PARFGKRKNV WQQTFEALSE CMDKHGALMA  240
STMESASRRQ CETMESASKR QCFIQIRQCE AIKAEVEIQK QHCSASTEVS KLMCQALLEI  300
ATAIRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.17e-06Trihelix family protein