PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80593.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 332aa    MW: 35517.7 Da    PI: 7.9773
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.59.8e-1078159279
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                 W+ +e  aL +++ e++    +++      +++ ++e++s++mr++g++r+ + C++kw +l  + k+i++  ++  s+ +s +
  GBG80593.1  78 WSADEQVALARVYGEDDALCASASgphrcmRRQDRLEWISNRMRAEGYRRNGEDCRKKWASLMEKAKEINDKCGR--SGGESYW 159
                 999999999999999999988775566667999*******************************99999998886..4444455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSRSRPSTGM GGEPLPALEA SSLPLPPISL PDGPPSPPPS NTAPRWGEEP STTTDASAGE  60
SDAGRAANKP PRKSSQLWSA DEQVALARVY GEDDALCASA SGPHRCMRRQ DRLEWISNRM  120
RAEGYRRNGE DCRKKWASLM EKAKEINDKC GRSGGESYWE MTTEKRRELG VHPAFDKVLW  180
DAMGWALRKP SVTCDHTLAS DNMQSPTDDV TSMRGEAGEG ASSGGGGRGK TARDALEGSD  240
SGTKSKRGRS RERRGNDDSP QSLSVAMREY IKAYCQGLEQ AACTMASATT KGAEIVGGRI  300
GEMVGKIEVV ADAMVGGNAV LCQLVRVLAA RS