PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG80125.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 497aa MW: 54524.6 Da PI: 9.9805

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG80125.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.1	3.6e-11	340	415	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + + aLi+ +r+ + +l+ r k ++ +W v+ ++++ g+ +++ +C +kw+nl +++kk+ + ++ GBG80125.1 340 WSVDDIIALIRDKRDQDAHLQgmghayaRMKPREWKWLVVATRLKKVGVDKEADRCGKKWDNLMQQFKKVHHFQGL 415 999*********777666643333326789999999*****************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MADVFRRLTL LLLVVLLLLL LVVFHVCILG GLPRRGRRRR CVKNNDRMEG RKAISGSAGE 60 RGGRWSGHSP SNSRRPSERS GHAHLPQHLQ PLPDTDDEEG DDRRSRTVPL GSGSTQEWAA 120 TELFGSRDGG KGQSYTELLQ QGLSDTDGDG GVNLSFGLGS GRSAAVSRTV VVNPHPDDDG 180 GDVTAVQRSP RSPAPLREAS GNNKDHPRQQ FRSPETAPAV ADVGDTRDGR EVWAEQRRLM 240 RSVREESITR GVQRLRVGED GHDGKEAVGD AHDPDWNDNG AEGGEDNAGY ISPSNQAAAI 300 GGRGGKTKSC ADNGRRGKRT AGRGSDAEGD VDGEGGRHFW SVDDIIALIR DKRDQDAHLQ 360 GMGHAYARMK PREWKWLVVA TRLKKVGVDK EADRCGKKWD NLMQQFKKVH HFQGLSGKQD 420 FFQLSGKDRM SKGFNFNMDR AVYDEILGST AKNHTINPKN VADTGAQGAR DGFSHNPFQM 480 RAQMKAIKMT HTQRLSL

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MADVFRRLTL LLLVVLLLLL LVVFHVCILG GLPRRGRRRR CVKNNDRMEG RKAISGSAGE  60
RGGRWSGHSP SNSRRPSERS GHAHLPQHLQ PLPDTDDEEG DDRRSRTVPL GSGSTQEWAA  120
TELFGSRDGG KGQSYTELLQ QGLSDTDGDG GVNLSFGLGS GRSAAVSRTV VVNPHPDDDG  180
GDVTAVQRSP RSPAPLREAS GNNKDHPRQQ FRSPETAPAV ADVGDTRDGR EVWAEQRRLM  240
RSVREESITR GVQRLRVGED GHDGKEAVGD AHDPDWNDNG AEGGEDNAGY ISPSNQAAAI  300
GGRGGKTKSC ADNGRRGKRT AGRGSDAEGD VDGEGGRHFW SVDDIIALIR DKRDQDAHLQ  360
GMGHAYARMK PREWKWLVVA TRLKKVGVDK EADRCGKKWD NLMQQFKKVH HFQGLSGKQD  420
FFQLSGKDRM SKGFNFNMDR AVYDEILGST AKNHTINPKN VADTGAQGAR DGFSHNPFQM  480
RAQMKAIKMT HTQRLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-08	Trihelix family protein