PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79868.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 835aa MW: 89634.2 Da PI: 8.1834

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.4	2.1e-09	330	405	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegek 69 Wt ++v aL++a+r ++++++r k k +W+++ +++ + g+ +r++ C +kw+nl +++k + + ++ GBG79868.1 330 WTVEHVIALVRAKRdqdlhlaGLGHNMGRMKTKTWKWADIESRLVQMGVtTRKADDCGKKWDNLYMQFKIVHKFMG 405 ************77777777778888999*********99999799***************9877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 835 aa Download sequence
MADLCRRLPL LLLAAVLLLA VVVFHICILG RVPGRKHRRR TTKATGKMEK VQTKRTMSVG 60 AGGSSRQRCS SAEGGKRPYD PTLYSHLPSH EIPLPPSDDD SDEPRSSTVP LGSGSTQDWM 120 GSQLFGLRSG SGQDVTHTVL VNPGSASNHT APSVGPCGLP DTRGRGCGQS GDERGLVSRG 180 RTAVDTAGVR AEGTRTGGST TAGGAVDRGG DDADGYVAEV AGREVWDDYR RQSRQSSTSA 240 ITRGVAKINV RADDTPDDCD GAGGEDLSAG DGGNDNDEDD DGEMEIRPLG KKRGGPRVTS 300 KSSEPRAGRR GKKTVGDASA GDEAKSKDFW TVEHVIALVR AKRDQDLHLA GLGHNMGRMK 360 TKTWKWADIE SRLVQMGVTT RKADDCGKKW DNLYMQFKIV HKFMGESGKP DFFSLAPRKR 420 KERGFDFRMD ERVYSEMISM SKGDHTKHPT NLADTGAAGG VQLPGRSGGR NESGGSDGCG 480 DGQDDDQGST RNSSFSGGVV GGCGKRKNVR QQTFDTMADV MKDHRSLMAT TVDSASKRQC 540 SILTRQCDIL ERELEVQKEH YVKTDQANLL MCDALMEIAK AIHFLPEEVV MVDAQGTSAA 600 PRLGFGRDGL TREQVSAVKQ SIAAGAAGAS QRTPKAAGVV ITEVHVPRQL PAARGLGQPR 660 QPLPLQQLGA SKGGKAQPAQ KGDATAIDTR RAAADRCGRT AVAEGAGEER VDDVRHDEGR 720 RDGKREGDDD DDRPLVTRLK GAAKEDGLEE RSKLWVDCDS FEGQGPGKPL REAVGECADY 780 FVTIANGDVG AEPPAMLILP PNDVPRFKID DPAQREPALR KARNVEKLVL RAIHR

Sequence ? help Back to Top

Protein Sequence Length: 835 aa Download sequence

MADLCRRLPL LLLAAVLLLA VVVFHICILG RVPGRKHRRR TTKATGKMEK VQTKRTMSVG  60
AGGSSRQRCS SAEGGKRPYD PTLYSHLPSH EIPLPPSDDD SDEPRSSTVP LGSGSTQDWM  120
GSQLFGLRSG SGQDVTHTVL VNPGSASNHT APSVGPCGLP DTRGRGCGQS GDERGLVSRG  180
RTAVDTAGVR AEGTRTGGST TAGGAVDRGG DDADGYVAEV AGREVWDDYR RQSRQSSTSA  240
ITRGVAKINV RADDTPDDCD GAGGEDLSAG DGGNDNDEDD DGEMEIRPLG KKRGGPRVTS  300
KSSEPRAGRR GKKTVGDASA GDEAKSKDFW TVEHVIALVR AKRDQDLHLA GLGHNMGRMK  360
TKTWKWADIE SRLVQMGVTT RKADDCGKKW DNLYMQFKIV HKFMGESGKP DFFSLAPRKR  420
KERGFDFRMD ERVYSEMISM SKGDHTKHPT NLADTGAAGG VQLPGRSGGR NESGGSDGCG  480
DGQDDDQGST RNSSFSGGVV GGCGKRKNVR QQTFDTMADV MKDHRSLMAT TVDSASKRQC  540
SILTRQCDIL ERELEVQKEH YVKTDQANLL MCDALMEIAK AIHFLPEEVV MVDAQGTSAA  600
PRLGFGRDGL TREQVSAVKQ SIAAGAAGAS QRTPKAAGVV ITEVHVPRQL PAARGLGQPR  660
QPLPLQQLGA SKGGKAQPAQ KGDATAIDTR RAAADRCGRT AVAEGAGEER VDDVRHDEGR  720
RDGKREGDDD DDRPLVTRLK GAAKEDGLEE RSKLWVDCDS FEGQGPGKPL REAVGECADY  780
FVTIANGDVG AEPPAMLILP PNDVPRFKID DPAQREPALR KARNVEKLVL RAIHR