PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79825.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

G2-like

Protein Properties

Length: 964aa MW: 99087.9 Da PI: 4.641

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.3	8.4e-29	382	435	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+++LH++Fv+av+qL G+ekA+Pk+ilelm+v+gLt+e+v+SHLQkYRl GBG79825.1 382 KARVVWSQDLHQQFVNAVTQL-GIEKAVPKKILELMNVQGLTRENVASHLQKYRL 435 68*****************.******************************8 PP
2	Myb_DNA-binding	43.6	6.6e-14	384	434	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W++++++++v+av+qlG + +k+I + m+ +g+t++++ s++qky+ GBG79825.1 384 RVVWSQDLHQQFVNAVTQLGIEkaVPKKILELMNvQGLTRENVASHLQKYR 434 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MLAPRGDISA IRQVHHPRFS LDPLRLAQFF GTTGVYAAAE FRFTSHRQVI VLAEATAVRW 60 LSAPGVSHVS TVVIFSGDIS VINPLRHTAI RTSLREWGQQ LATEWNQWLT RRGDNLIPTD 120 DIEVGGLRTS RHEPAVLTWT RDIEHRAWVA YVELLVIQAW RTEVEGDLLG FLFGSVRPGY 180 RQQIVQELTI PLVQLADDLP LDIISQCDES PVPHVLSRTL THYLQWSACP EELANNNNPP 240 SQQLYLDPRG IIDLAFFQPR TTSEDEAITL EEEEEEDEEG GDEEEEEETP EEGSYREHSE 300 GEQSDEDEEE EKDQLEEEEE SEWETLGEEA DRAEPHEEDP EAARRREEIA AGKSGGSSLV 360 EKRKDKNGGN EEPLEDANSL KKARVVWSQD LHQQFVNAVT QLGIEKAVPK KILELMNVQG 420 LTRENVASHL QKYRLYLKRL SGVETAQHAS LTYQPSAEAG LSGSMQINNA ARAVVGPGVG 480 NTLARAFNLA GLAGLGGIGV GLGGAMGKSP GNGGLVGGLS GLECLTGGGL DAADLVRGLQ 540 VFQGQTIAHS QSATLAHLQR TGAHGSGAGA AAALMGSSAA GLLGGLTAAA GAGAGIGDLS 600 QMDLNLLFNA QQEVVARSRL GLGGADDSLA SSLMAGFGNP ALAVLGNAAG LGPGGGGAMS 660 PMSMLGGSSL CSGGNLGSGN PGGDGGCLGN GLMTGGGGAR VGGGGGGGGV QLTEGMNPLR 720 LDGSGLTAGS AGGAGGARGA ADRILTGDAG ALRNPLQSTC CMLTSRAGGG AGAGGGAGPQ 780 TGYLQQQQQQ GGPAAGGSAD VRGLSPQNVD SIRALGGVAG GGVVLGGGGG AGGGGDVAES 840 KPLVSMLRSV DHMSSLVTAE SKPLVSLGGG VTGGANCLAP PAPSIYGGST GGTAGELSPY 900 RSVTGGAGGS SSGILVLAGG DEHQRRHLPS PLGQMLLTHG TPNRYVTERN GHHTSSQNVN 960 SFPT

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MLAPRGDISA IRQVHHPRFS LDPLRLAQFF GTTGVYAAAE FRFTSHRQVI VLAEATAVRW  60
LSAPGVSHVS TVVIFSGDIS VINPLRHTAI RTSLREWGQQ LATEWNQWLT RRGDNLIPTD  120
DIEVGGLRTS RHEPAVLTWT RDIEHRAWVA YVELLVIQAW RTEVEGDLLG FLFGSVRPGY  180
RQQIVQELTI PLVQLADDLP LDIISQCDES PVPHVLSRTL THYLQWSACP EELANNNNPP  240
SQQLYLDPRG IIDLAFFQPR TTSEDEAITL EEEEEEDEEG GDEEEEEETP EEGSYREHSE  300
GEQSDEDEEE EKDQLEEEEE SEWETLGEEA DRAEPHEEDP EAARRREEIA AGKSGGSSLV  360
EKRKDKNGGN EEPLEDANSL KKARVVWSQD LHQQFVNAVT QLGIEKAVPK KILELMNVQG  420
LTRENVASHL QKYRLYLKRL SGVETAQHAS LTYQPSAEAG LSGSMQINNA ARAVVGPGVG  480
NTLARAFNLA GLAGLGGIGV GLGGAMGKSP GNGGLVGGLS GLECLTGGGL DAADLVRGLQ  540
VFQGQTIAHS QSATLAHLQR TGAHGSGAGA AAALMGSSAA GLLGGLTAAA GAGAGIGDLS  600
QMDLNLLFNA QQEVVARSRL GLGGADDSLA SSLMAGFGNP ALAVLGNAAG LGPGGGGAMS  660
PMSMLGGSSL CSGGNLGSGN PGGDGGCLGN GLMTGGGGAR VGGGGGGGGV QLTEGMNPLR  720
LDGSGLTAGS AGGAGGARGA ADRILTGDAG ALRNPLQSTC CMLTSRAGGG AGAGGGAGPQ  780
TGYLQQQQQQ GGPAAGGSAD VRGLSPQNVD SIRALGGVAG GGVVLGGGGG AGGGGDVAES  840
KPLVSMLRSV DHMSSLVTAE SKPLVSLGGG VTGGANCLAP PAPSIYGGST GGTAGELSPY  900
RSVTGGAGGS SSGILVLAGG DEHQRRHLPS PLGQMLLTHG TPNRYVTERN GHHTSSQNVN  960
SFPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	1e-30	ARR-B family protein