PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79604.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 553aa MW: 59435.6 Da PI: 6.2576

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.5	2.3e-10	297	371	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + aL++a+r +++++ r k ++ +We+v ++++ g++r ++ C +kw+nl +++kk+ + ++ GBG79604.1 297 WSVGDTVALVRAKRdqdlyitGLGTSFTRMKTAAWKWEDVRVRLQAMGVTRDAVDCGKKWDNLMQQFKKVHKFQN 371 888889999999997777777788899999***************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MAGRLPNGRR AGTSGGSINR QRSAGSVAKQ PYDLRLYAHL PSHEIPLPPS DDKGGEARSP 60 TLPLGSGSMQ DWEATQSCGD RGVETPWSYT SLLNEGLCDD DGDAAVDLSF HQSSSSGAAA 120 THTRIINPHP GGDYADNTPS VGEGDRNNSS PSVGGGIGAR KRPDWMCLSP AARSGPDASR 180 GRQPAEDLIG GVPDVERNGT QVWAKCRQEL HRGETETITR GVQRLHVDEV EDAAVDEGQG 240 CDDVDGEDGC KSDDLPDIRP LGRRATRGGS GAKKGPATKP RRTKNMDDDG EGSRNFWSVG 300 DTVALVRAKR DQDLYITGLG TSFTRMKTAA WKWEDVRVRL QAMGVTRDAV DCGKKWDNLM 360 QQFKKVHKFQ NLSGGKDYFR LASRDRQSEG FSFGMDRSVY DEMEAMTKGD HRIHPTNLAD 420 TGAAGGVQMP ASVGGGGGGT LGGDGGGDTA DEEQGSTKDS SFSVGSGGGY GKRKNMRQQT 480 FEAVADIMEK HGVVIAGTMD SASKRQCYMM SRQCKILESE VEVQRKHYAA ADEANRMMCD 540 ALLEIAKVIR ERS

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MAGRLPNGRR AGTSGGSINR QRSAGSVAKQ PYDLRLYAHL PSHEIPLPPS DDKGGEARSP  60
TLPLGSGSMQ DWEATQSCGD RGVETPWSYT SLLNEGLCDD DGDAAVDLSF HQSSSSGAAA  120
THTRIINPHP GGDYADNTPS VGEGDRNNSS PSVGGGIGAR KRPDWMCLSP AARSGPDASR  180
GRQPAEDLIG GVPDVERNGT QVWAKCRQEL HRGETETITR GVQRLHVDEV EDAAVDEGQG  240
CDDVDGEDGC KSDDLPDIRP LGRRATRGGS GAKKGPATKP RRTKNMDDDG EGSRNFWSVG  300
DTVALVRAKR DQDLYITGLG TSFTRMKTAA WKWEDVRVRL QAMGVTRDAV DCGKKWDNLM  360
QQFKKVHKFQ NLSGGKDYFR LASRDRQSEG FSFGMDRSVY DEMEAMTKGD HRIHPTNLAD  420
TGAAGGVQMP ASVGGGGGGT LGGDGGGDTA DEEQGSTKDS SFSVGSGGGY GKRKNMRQQT  480
FEAVADIMEK HGVVIAGTMD SASKRQCYMM SRQCKILESE VEVQRKHYAA ADEANRMMCD  540
ALLEIAKVIR ERS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	5e-08	Trihelix family protein