PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79596.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

MYB_related

Protein Properties

Length: 937aa MW: 101873 Da PI: 6.4498

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5e-16	211	255	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + ++++eEd l+++ +k++G++ W++Ia+++ gRt++ +k++w++ GBG79596.1 211 KEPFSEEEDRLIIESHKKHGNK-WAAIAKEFS-GRTDNAIKNHWNST 255 579*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 937 aa Download sequence
MIGRVRSGSE RMVRRRRSAA TWKGDPLQWQ GQGAFGRQWA EHGTYKIGYL WNELTNSWRQ 60 WAEHGTYKIG YLWNELTNSW KSDEEMAHIL PYQEDNRLRE LVNTYGPRNW YVVETTSAKI 120 MAMMMVMMMI VMMLNDDDDD NDDGHFDNDD DDDDHNGNDD DGDEHDMRKT QRENTSHANG 180 RAPHGVGWHV LNQLTSEWLT QKSKLNPAVK KEPFSEEEDR LIIESHKKHG NKWAAIAKEF 240 SGRTDNAIKN HWNSTLLRKY PELSQRSSSA LSSTTQDTCH QLAAADTDGD STAGTDEEPP 300 GSSSLSPSPP SKRQQPPRWE DDGKLQKRIR APMPFCSSPV GCLPRTPTTP SGPLSPLVGS 360 PLSQLDLVLQ SNELSRRVRG LASRVYPLQG AAGPPHPQPP PPPLPIPTVS SGKRHKQDLE 420 SGGFLSQGES PSTTTASSPP SPLMMMRSLD PGPTLSLCTG NDMDLGATSS HMTDFSLSTR 480 LNPLERGHVP SFSKSPTSIR TSATPSGTGL EGGECGRGAG LARPHRSLPL DLLDPGEEQR 540 RTTASSTSGR RDRDRGGKSY LEPVVGLGLG LALGATAGSE DDEMEARPSS GGCIKGLCHQ 600 DGIHSRTGAH VSGTVRPQAV RCTPQSATLA SAILQILPGL TQLEMASSGG ACGASSSTSV 660 SSAEQAAVAA AAALPQEVKE KVVAECIMFT HAMAQMSMRW HKQKQEEELH QNQPQQHLCP 720 YQDHQQAQPQ QQKQPLDGVS QHVEESQSIS NHDHYEEEWH HQACPIQSQS QSQKHLHLLD 780 CRPHHSHHMQ DHHHHNQNHG YSSQDLVVVP DWSTNNQEAS DISPASAALG RLSTVTSPAS 840 GSASAPSLAM MTDQEDGGHR GCWNGNMTAG GVGVVATPEA AAGGPGLLRR TRLTAFSNFS 900 PRSNASITTA NVAAGGEESS RMLNLDSLAD GLNQRSP

Sequence ? help Back to Top

Protein Sequence Length: 937 aa Download sequence

MIGRVRSGSE RMVRRRRSAA TWKGDPLQWQ GQGAFGRQWA EHGTYKIGYL WNELTNSWRQ  60
WAEHGTYKIG YLWNELTNSW KSDEEMAHIL PYQEDNRLRE LVNTYGPRNW YVVETTSAKI  120
MAMMMVMMMI VMMLNDDDDD NDDGHFDNDD DDDDHNGNDD DGDEHDMRKT QRENTSHANG  180
RAPHGVGWHV LNQLTSEWLT QKSKLNPAVK KEPFSEEEDR LIIESHKKHG NKWAAIAKEF  240
SGRTDNAIKN HWNSTLLRKY PELSQRSSSA LSSTTQDTCH QLAAADTDGD STAGTDEEPP  300
GSSSLSPSPP SKRQQPPRWE DDGKLQKRIR APMPFCSSPV GCLPRTPTTP SGPLSPLVGS  360
PLSQLDLVLQ SNELSRRVRG LASRVYPLQG AAGPPHPQPP PPPLPIPTVS SGKRHKQDLE  420
SGGFLSQGES PSTTTASSPP SPLMMMRSLD PGPTLSLCTG NDMDLGATSS HMTDFSLSTR  480
LNPLERGHVP SFSKSPTSIR TSATPSGTGL EGGECGRGAG LARPHRSLPL DLLDPGEEQR  540
RTTASSTSGR RDRDRGGKSY LEPVVGLGLG LALGATAGSE DDEMEARPSS GGCIKGLCHQ  600
DGIHSRTGAH VSGTVRPQAV RCTPQSATLA SAILQILPGL TQLEMASSGG ACGASSSTSV  660
SSAEQAAVAA AAALPQEVKE KVVAECIMFT HAMAQMSMRW HKQKQEEELH QNQPQQHLCP  720
YQDHQQAQPQ QQKQPLDGVS QHVEESQSIS NHDHYEEEWH HQACPIQSQS QSQKHLHLLD  780
CRPHHSHHMQ DHHHHNQNHG YSSQDLVVVP DWSTNNQEAS DISPASAALG RLSTVTSPAS  840
GSASAPSLAM MTDQEDGGHR GCWNGNMTAG GVGVVATPEA AAGGPGLLRR TRLTAFSNFS  900
PRSNASITTA NVAAGGEESS RMLNLDSLAD GLNQRSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	2e-21	MYB family protein