PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG79507.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 506aa    MW: 54929.2 Da    PI: 6.3406
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG79507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.11.1e-13346417266
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                 W+ +++ aLi+a+r+ + +++       r k ++ +W++v+++++  g+ r++++C +kw+nl +++kk+ +
  GBG79507.1 346 WSVEHIIALIRAKRDQDAHVQgmghayaRMKPREWKWQDVAQRLKNVGVYRNAEKCGKKWDNLMQQFKKVHH 417
                 9*************666666633333326799*************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MPPRRRKTRS SMKDARMEAR QAIPQFGGEQ VGGRRCGGSL STVGRASQRV GCDAFPPHLQ  60
PLPGSSDEEE EVERWPQTVS LGCGSMQEWS ATELCGTGGD VYEQSFTQLL RPGLGEDEGD  120
GRVNLSFGLS TGRSTTPSHT VLVRPHPGDE GGQLTAVDRS ARTRALASEM AGANRNSSTA  180
QPRAASLSKG AQGRPEWMQL PSPLSAASEV ARGRGVGVDG GTDFLDVGDG RDGREVWRDL  240
RRDHRLRREE YITRGVERLH VGDWENENET DDPRAEADDD DDEDNDVECG KGGGGHASPS  300
LQTGMAGKGG KSKPSGRNAR SRAKKGQGKG SGGEGDGDAE EKRNFWSVEH IIALIRAKRD  360
QDAHVQGMGH AYARMKPREW KWQDVAQRLK NVGVYRNAEK CGKKWDNLMQ QFKKVHHFQS  420
PSGGADFFQL TSKERASRGF NFTMDRSVYD EIEGSTGMNH TIHLRNVADT GAPGGVRPPS  480
TSYVDPDSVA DGEGGAGRED DEEGSM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
137PRRRK
2319327ARSRAKKGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-11Trihelix family protein