PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79430.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 817aa MW: 89212.6 Da PI: 7.0456

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.2	3.1e-11	321	387	1	70
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 +W+++e +aL+ e e+++r++lk++ W+ ++mr++g++r qCk+k++++ +y+++k++e+ GBG79430.1 321 CWCRNEAKALM---GEETEAFGRARLKAGFWKYEEERMRAKGYNRADDQCKNKFNQILDYYRRLKAHERW 387 79999999998...577889**********************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MAQYTQSTGL SCIDDWGWSE SQNDAPPAAG SVPARSAGPV CGAEYAKVTE CAAFAPRSQV 60 VTGTPALSSP VTPVRGFRIG LGGDDEHTLR QRLRMRAMAM ADGLTPAMDK RPVGGYETSQ 120 ARNAGSQHGS PGPSSVSSVN TNTMPSQQSG APSAMLPVGH GSPRASSEPL CDGALGQQVS 180 QYATSSEYVL NCIINDIEAG VNPTEHVDAG RDGGQVVASQ TTPSDTPPRC GSSGGAAAGT 240 PPPMSTESGS HHTPPRCPSS GGVAAGSPSP LTGDGCSHTP PTTLQGPGTS AGGPSAGHPP 300 RPCQVEKNTD RWGETKTEWL CWCRNEAKAL MGEETEAFGR ARLKAGFWKY EEERMRAKGY 360 NRADDQCKNK FNQILDYYRR LKAHERWSGL PSYWDMNQTR RKKYNVDFVL RRSWYDVIHP 420 VEKDKDSINL SNLMDSGADE ERLEDGEGVN DGDGEMDGDG GDPTVGSGSS AGGSRSTGFD 480 PTLGKRKRTA SNARESGVEA VTAAMRAHTT ALTRSDLTIA KMRCEATRDI AKQQAELCVR 540 AVAEFHDQAT AGHMGFHKTL ARVSRLYVWP KRKDFVKDYV AECPTCQEVN NANHLPYGLI 600 QPLPIPEGRW QSILMDFIGP LRPPTPRSHD AILVVIDCFM KRAHFVPCRY AISARELADI 660 VFDRVVRDHD LPLSIISDRD PRFTNRLWRR LHKVYSTHLH FSSSYHPQTN CQTEVTNMTL 720 RDILRKIIRD DQQWDLHLAY AEIAYNHDVS LATGMSPYYG DLGYHPRVPA DFLRPSQMHP 780 DTTCPTLDDW VAHMTSIMKT AHEHIASSQT RMAAHAS

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MAQYTQSTGL SCIDDWGWSE SQNDAPPAAG SVPARSAGPV CGAEYAKVTE CAAFAPRSQV  60
VTGTPALSSP VTPVRGFRIG LGGDDEHTLR QRLRMRAMAM ADGLTPAMDK RPVGGYETSQ  120
ARNAGSQHGS PGPSSVSSVN TNTMPSQQSG APSAMLPVGH GSPRASSEPL CDGALGQQVS  180
QYATSSEYVL NCIINDIEAG VNPTEHVDAG RDGGQVVASQ TTPSDTPPRC GSSGGAAAGT  240
PPPMSTESGS HHTPPRCPSS GGVAAGSPSP LTGDGCSHTP PTTLQGPGTS AGGPSAGHPP  300
RPCQVEKNTD RWGETKTEWL CWCRNEAKAL MGEETEAFGR ARLKAGFWKY EEERMRAKGY  360
NRADDQCKNK FNQILDYYRR LKAHERWSGL PSYWDMNQTR RKKYNVDFVL RRSWYDVIHP  420
VEKDKDSINL SNLMDSGADE ERLEDGEGVN DGDGEMDGDG GDPTVGSGSS AGGSRSTGFD  480
PTLGKRKRTA SNARESGVEA VTAAMRAHTT ALTRSDLTIA KMRCEATRDI AKQQAELCVR  540
AVAEFHDQAT AGHMGFHKTL ARVSRLYVWP KRKDFVKDYV AECPTCQEVN NANHLPYGLI  600
QPLPIPEGRW QSILMDFIGP LRPPTPRSHD AILVVIDCFM KRAHFVPCRY AISARELADI  660
VFDRVVRDHD LPLSIISDRD PRFTNRLWRR LHKVYSTHLH FSSSYHPQTN CQTEVTNMTL  720
RDILRKIIRD DQQWDLHLAY AEIAYNHDVS LATGMSPYYG DLGYHPRVPA DFLRPSQMHP  780
DTTCPTLDDW VAHMTSIMKT AHEHIASSQT RMAAHAS