PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79076.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 910aa MW: 98284.9 Da PI: 6.76

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33	1.6e-10	364	438	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e ++L++ +r +++++++r + k+ +W++++k+m+ +g + ++ C +kw+n+ + ykk+++ ++ GBG79076.1 364 WSPEEQMQLVRCKReqemhlaSLGHNYGRMRTKEWKWDDIAKRMANTGRPKDAEDCMKKWDNIFQNYKKVQRFQN 438 9***********44444444444455678************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 910 aa Download sequence
MADMQRRLPL LLLVVVVFVF VVFLHVCLSC RPWKQRRKRR ASTKGAVLQE GRPMAGMQAG 60 AVLPAAEGGS KPATTEPSWW YDPFMYSHLP SWETPLPPSD EEPVGDELPT FPLGSGLTQM 120 LSQTVLAGGS ACNGRSEYTT LLQQGLGDDD DGGVDLRFGL CSGGGREPSR TFIIDADPSP 180 RGVQQFGSRH TEQSTLRGGA SVTGGVEPSA SGRQHGSSAA SADRLISTCP AHHGVVVGSL 240 RIGGTLHSTP KTTTPAQPDL RDDGTCRPAV RPTSTVENIT RGVSNMRAHS DGGDDDGGGG 300 DDADERFGED VEAGDDDDDI PIRPLGKTGG RGKGRSRGVV RGRSVGRGGR GGVSDDDGKS 360 ATYWSPEEQM QLVRCKREQE MHLASLGHNY GRMRTKEWKW DDIAKRMANT GRPKDAEDCM 420 KKWDNIFQNY KKVQRFQNAS GRPDFFRLSN EERKEHNFKF RMERTLYNEI HAGMVGNHTI 480 FPPNIADTGS PDGVQLPRRG AGAGESVGSE GTGEGFPEEH STTRDSDNNA ASRAGGGKWK 540 NARQQVLESI ADVMDRHGEL MSSTIESSSK QQCSIFTRQC DILEQEVAVQ KAHYTASDET 600 QRMMCQALME IAAAIRGRSP MSPRNISMRG NTRGKKRDVV VDDTQGQGRG RRQAPKAKRL 660 RTEDASAGVP RRGAQGWAAA AEGDYDDELK TEEEQAEATT CEVRESGRQR SSDHTASKRM 720 LTPPPEAQQL RGRETRTEKA PVVDLGGDDD EPLERRRICI HTTATPPPEV AVRVTANERP 780 VSGRLPATLC QPRQCNEGGN GGSVQRGGGG EVVADERAVG AEEGGAAGTG GSGTVAAVAM 840 AREEAAVGAT AREEAHGERK GDWEAGECGS SRVHRSVMTK YLIDRAVLWV DDKAFRTTGR 900 GEDCTTSSTR

Sequence ? help Back to Top

Protein Sequence Length: 910 aa Download sequence

MADMQRRLPL LLLVVVVFVF VVFLHVCLSC RPWKQRRKRR ASTKGAVLQE GRPMAGMQAG  60
AVLPAAEGGS KPATTEPSWW YDPFMYSHLP SWETPLPPSD EEPVGDELPT FPLGSGLTQM  120
LSQTVLAGGS ACNGRSEYTT LLQQGLGDDD DGGVDLRFGL CSGGGREPSR TFIIDADPSP  180
RGVQQFGSRH TEQSTLRGGA SVTGGVEPSA SGRQHGSSAA SADRLISTCP AHHGVVVGSL  240
RIGGTLHSTP KTTTPAQPDL RDDGTCRPAV RPTSTVENIT RGVSNMRAHS DGGDDDGGGG  300
DDADERFGED VEAGDDDDDI PIRPLGKTGG RGKGRSRGVV RGRSVGRGGR GGVSDDDGKS  360
ATYWSPEEQM QLVRCKREQE MHLASLGHNY GRMRTKEWKW DDIAKRMANT GRPKDAEDCM  420
KKWDNIFQNY KKVQRFQNAS GRPDFFRLSN EERKEHNFKF RMERTLYNEI HAGMVGNHTI  480
FPPNIADTGS PDGVQLPRRG AGAGESVGSE GTGEGFPEEH STTRDSDNNA ASRAGGGKWK  540
NARQQVLESI ADVMDRHGEL MSSTIESSSK QQCSIFTRQC DILEQEVAVQ KAHYTASDET  600
QRMMCQALME IAAAIRGRSP MSPRNISMRG NTRGKKRDVV VDDTQGQGRG RRQAPKAKRL  660
RTEDASAGVP RRGAQGWAAA AEGDYDDELK TEEEQAEATT CEVRESGRQR SSDHTASKRM  720
LTPPPEAQQL RGRETRTEKA PVVDLGGDDD EPLERRRICI HTTATPPPEV AVRVTANERP  780
VSGRLPATLC QPRQCNEGGN GGSVQRGGGG EVVADERAVG AEEGGAAGTG GSGTVAAVAM  840
AREEAAVGAT AREEAHGERK GDWEAGECGS SRVHRSVMTK YLIDRAVLWV DDKAFRTTGR  900
GEDCTTSSTR