PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG79060.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 374aa    MW: 40969.7 Da    PI: 9.4831
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG79060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.39.6e-09298370266
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkike 66 
                 Wt ++  aLi+a+r+ +++l        r k k  +W++v k++ + g+ +r+ + C +kw+n+ +++k + +
  GBG79060.1 298 WTVEHMIALIRAKRDQDSHLAglahttgRMKTKTWKWDDVEKRLVHMGVtSRKVIDCGKKWDNVFQQFKTVHK 370
                 **************888888855554335689999*********99999799*****************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MADLYRRLPL LLLAVLLLLA VVVFHICCLV RVPGRKQTRR TPKTARKMER VQTRTTLSVG  60
AAGSSRQRCR SAEAVSRPYD PALYSHLPSH DIPLPPSDDD GDDPRCSTLP LGSGSTQDWM  120
GSQLHRRALT TTYTDLLEGC APAGYDTGLV DLSFGLRSGS AGEATRTVIV NPASGTTHAL  180
PPVTTQTGRS VPCRTMTVGG TVDGRRPTKS GQQRRSLVES FGMIIAAIAG VAEDCEADDG  240
ACKDDEEDDE DMEIRPLGRK RGVSTAAKKL PETRMGRRGK KGVEDASAGE GSKSRDFWTV  300
EHMIALIRAK RDQDSHLAGL AHTTGRMKTK TWKWDDVEKR LVHMGVTSRK VIDCGKKWDN  360
VFQQFKTVHK FMGE