PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG78574.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 906aa MW: 97952.7 Da PI: 9.1735

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG78574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.4	2.1e-09	312	385	2	68
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +e ++L++ +re+e +l r + k+ +W++++k+m+ g + +k C +kw+n+ + +kki + + GBG78574.1 312 WSSEEQMQLVRCKREREMHLAglghnygRMRTKEWKWDDIAKRMANAGRPKDAKDCMKKWDNIFQNHKKIHRFQ 385 ************77777764443333678************************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 906 aa Download sequence
MAGMQARAVL LAAEGGRRPA TTEPHGGTTR PCTAICRRGR RRCLPRTRSR RGMNFQRFLS 60 AAVRRNCCRR WCSQAGRQAT DAASTRHSCR LQQGLGGDGD GGVDLRFGLC SGGARESSHT 120 FIIDADPSPR GVQQSGSQHT EQSTLRGGVS VSGVGPSAAG RQHGSSAPSA DRLTSTCPAH 180 NGVAVGFLHI GGARPSMSKS TTPTQPDLRD DGTCRPAVRP APTVENITRG VSNMRAHSDG 240 GDDDGGGGDD ADERFREDVE AGDDDDDIPI RPLGKTGGRG RGRSRGAVHG RSVGRGGRGG 300 VSDDGGKSVT YWSSEEQMQL VRCKREREMH LAGLGHNYGR MRTKEWKWDD IAKRMANAGR 360 PKDAKDCMKK WDNIFQNHKK IHRFQNASGR PDFFRLSNEE RKEHNFKFRM ERALYNEIHT 420 GMVGNHTVFP PNIADTGSPD GVQLPRRGAG AGESRSPRNM STRGNTRGTK RDVVPDDSQG 480 QGRGQRQAPK AKRVRSEDAS ARVPRRGAQG WAAAAEGDYD EEFTTEEEQA EVTTSEVRES 540 GRQRSSHHTA SKRMLTPPPE AQQLCGGETR TEKAPVVDLG GDHDEPLERR RIRIRTTATP 600 PPAVTARAAA NERPVSGRLS ATPSQRRQRN EGGDGGSVQC GSGGEVMADA RAVGAEEAGA 660 AGAGGSGTVA AVATAKEEAT VVATTREEAR GEKKGDREAG EPGTARSGAT LSVRRFARTI 720 DLSMDLPLWL AGANIEDRPD DDDMAAHQES TVICVVHAFR AVVQMGALID GEFISHDRLC 780 RVVDCFRLLL AACMWIMRMA GDDPRSHYKA FYFTNLVGKP TLVAAMHRSF DHRRSVVRAA 840 KVVTERFGKA NATLGQYPDY IPQWALCDIG FRHDASITGP EDAKKLDWLG SASPDDDNNN 900 EGKNDV

Sequence ? help Back to Top

Protein Sequence Length: 906 aa Download sequence

MAGMQARAVL LAAEGGRRPA TTEPHGGTTR PCTAICRRGR RRCLPRTRSR RGMNFQRFLS  60
AAVRRNCCRR WCSQAGRQAT DAASTRHSCR LQQGLGGDGD GGVDLRFGLC SGGARESSHT  120
FIIDADPSPR GVQQSGSQHT EQSTLRGGVS VSGVGPSAAG RQHGSSAPSA DRLTSTCPAH  180
NGVAVGFLHI GGARPSMSKS TTPTQPDLRD DGTCRPAVRP APTVENITRG VSNMRAHSDG  240
GDDDGGGGDD ADERFREDVE AGDDDDDIPI RPLGKTGGRG RGRSRGAVHG RSVGRGGRGG  300
VSDDGGKSVT YWSSEEQMQL VRCKREREMH LAGLGHNYGR MRTKEWKWDD IAKRMANAGR  360
PKDAKDCMKK WDNIFQNHKK IHRFQNASGR PDFFRLSNEE RKEHNFKFRM ERALYNEIHT  420
GMVGNHTVFP PNIADTGSPD GVQLPRRGAG AGESRSPRNM STRGNTRGTK RDVVPDDSQG  480
QGRGQRQAPK AKRVRSEDAS ARVPRRGAQG WAAAAEGDYD EEFTTEEEQA EVTTSEVRES  540
GRQRSSHHTA SKRMLTPPPE AQQLCGGETR TEKAPVVDLG GDHDEPLERR RIRIRTTATP  600
PPAVTARAAA NERPVSGRLS ATPSQRRQRN EGGDGGSVQC GSGGEVMADA RAVGAEEAGA  660
AGAGGSGTVA AVATAKEEAT VVATTREEAR GEKKGDREAG EPGTARSGAT LSVRRFARTI  720
DLSMDLPLWL AGANIEDRPD DDDMAAHQES TVICVVHAFR AVVQMGALID GEFISHDRLC  780
RVVDCFRLLL AACMWIMRMA GDDPRSHYKA FYFTNLVGKP TLVAAMHRSF DHRRSVVRAA  840
KVVTERFGKA NATLGQYPDY IPQWALCDIG FRHDASITGP EDAKKLDWLG SASPDDDNNN  900
EGKNDV