PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77749.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 769aa MW: 84144 Da PI: 6.9954

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.7	1.5e-13	377	452	2	70
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e l+L++ +r+ ++ + ++ k k ++W e++k+m+++g++r +qC ++wen+ + y+k+ ++ek GBG77749.1 377 WSLNESLVLVRCKRDQDDYFANAgtnfarmKTKDQKWMEIAKRMEKEGVRRDGEQCMKRWENIFGWYRKVWDREKA 452 ************77777775423333338*************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MADMVRKLAL LIILIGVVVL LIALHACHLA DARIRRGRRK GLKTLRQGAS GSKGMGDEYT 60 RGCEGFGMGR GAYGGGSGMQ HNLHHRFDPN LYSHLPPHQQ PLPDDTTWTP PPSTLGLAWG 120 STLTSYDTPL RVESNGGGVG PMSALLGETR GRGRHPFDSQ LSPTATMDVS GTALVQRSGQ 180 GGGASTQTMH ASVLDDGVSM HRPNHMSRPA PSKAAPAGSV PYHQPAAGAA MQDQRADVGG 240 VAESPRCVER IVCRFNSLRA TSEGDEAGAA MQERRPDLGG VAESPRCVER IVCRYNSSRP 300 TTDGDVGGRD GGASEADRVD VEDDDGDEED KDEAPLKEAV FGGTKKQPSK VRGKAKGKDK 360 EGDTNGEGGG SGARGNWSLN ESLVLVRCKR DQDDYFANAG TNFARMKTKD QKWMEIAKRM 420 EKEGVRRDGE QCMKRWENIF GWYRKVWDRE KASGLQSYFL MTTKAWKEKG YKFNLDRTLY 480 DAIHIMQGNN QAVHPPNLMD TGNTQGQQSQ QGEQSQAATG GGEADTSASE NRGADTEDGC 540 GSRSSSNGIQ GKWKNARQLA FEAVTDVMKT HSTVVAESVD RASKRQCDVL QRYGNSEIVR 600 GGHRGVVVTE VEIEHCSCVR VRRCASMDIQ VALRGRVLSR TITFYEMRHR RGEKDGRLFD 660 FVGEVSGQEV RHYEVDTNGD TILNVIVALG YVDEMLREVV GYATKVRRAI PDRWEGGVDV 720 LADIVDLLMS NIANEHDDHM TVPADFRVWP DPPLHDRPGL RGEIRNIDE

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MADMVRKLAL LIILIGVVVL LIALHACHLA DARIRRGRRK GLKTLRQGAS GSKGMGDEYT  60
RGCEGFGMGR GAYGGGSGMQ HNLHHRFDPN LYSHLPPHQQ PLPDDTTWTP PPSTLGLAWG  120
STLTSYDTPL RVESNGGGVG PMSALLGETR GRGRHPFDSQ LSPTATMDVS GTALVQRSGQ  180
GGGASTQTMH ASVLDDGVSM HRPNHMSRPA PSKAAPAGSV PYHQPAAGAA MQDQRADVGG  240
VAESPRCVER IVCRFNSLRA TSEGDEAGAA MQERRPDLGG VAESPRCVER IVCRYNSSRP  300
TTDGDVGGRD GGASEADRVD VEDDDGDEED KDEAPLKEAV FGGTKKQPSK VRGKAKGKDK  360
EGDTNGEGGG SGARGNWSLN ESLVLVRCKR DQDDYFANAG TNFARMKTKD QKWMEIAKRM  420
EKEGVRRDGE QCMKRWENIF GWYRKVWDRE KASGLQSYFL MTTKAWKEKG YKFNLDRTLY  480
DAIHIMQGNN QAVHPPNLMD TGNTQGQQSQ QGEQSQAATG GGEADTSASE NRGADTEDGC  540
GSRSSSNGIQ GKWKNARQLA FEAVTDVMKT HSTVVAESVD RASKRQCDVL QRYGNSEIVR  600
GGHRGVVVTE VEIEHCSCVR VRRCASMDIQ VALRGRVLSR TITFYEMRHR RGEKDGRLFD  660
FVGEVSGQEV RHYEVDTNGD TILNVIVALG YVDEMLREVV GYATKVRRAI PDRWEGGVDV  720
LADIVDLLMS NIANEHDDHM TVPADFRVWP DPPLHDRPGL RGEIRNIDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-08	Trihelix family protein